| A point‐charge force field for molecular mechanics simulations of proteins based on condensed‐phase quantum mechanical calculations Y Duan, C Wu, S Chowdhury, MC Lee, G Xiong, W Zhang, R Yang, ... Journal of computational chemistry 24 (16), 1999-2012, 2003 | 5033 | 2003 |
| Ab initio folding simulation of the Trp-cage mini-protein approaches NMR resolution S Chowdhury, MC Lee, G Xiong, Y Duan Journal of molecular biology 327 (3), 711-717, 2003 | 202 | 2003 |
| others. 2003. A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations Y Duan, C Wu, S Chowdhury, MC Lee, G Xiong, W Zhang, R Yang, ... J. Comput. Chem 24, 1999-2012, 0 | 95 | |
| Characterizing the rate-limiting step of Trp-cage folding by all-atom molecular dynamics simulations S Chowdhury, MC Lee, Y Duan The Journal of Physical Chemistry B 108 (36), 13855-13865, 2004 | 76 | 2004 |
| G-quadruplex structure can be stable with only some coordination sites being occupied by cations: a six-nanosecond molecular dynamics study S Chowdhury, M Bansal The Journal of Physical Chemistry B 105 (31), 7572-7578, 2001 | 73 | 2001 |
| Breaking non‐native hydrophobic clusters is the rate‐limiting step in the folding of an alanine‐based peptide S Chowdhury, W Zhang, C Wu, G Xiong, Y Duan Biopolymers: Original Research on Biomolecules 68 (1), 63-75, 2003 | 65 | 2003 |
| Dysregulated expression but redundant function of the long non-coding RNA HOTAIR in diabetic kidney disease S Majumder, MJ Hadden, K Thieme, SN Batchu, D Niveditha, ... Diabetologia 62, 2129-2142, 2019 | 49 | 2019 |
| Fs-21 Peptides Can Form Both Single Helix and Helix− Turn− Helix W Zhang, H Lei, S Chowdhury, Y Duan The Journal of Physical Chemistry B 108 (22), 7479-7489, 2004 | 45 | 2004 |
| Common and unique microRNAs in multiple carcinomas regulate similar network of pathways to mediate cancer progression D Niveditha, M Jasoria, J Narayan, S Majumder, S Mukherjee, ... Scientific Reports 10 (1), 2331, 2020 | 35 | 2020 |
| Verteporfin disrupts multiple steps of autophagy and regulates p53 to sensitize osteosarcoma cells H Saini, H Sharma, S Mukherjee, S Chowdhury, R Chowdhury Cancer Cell International 21, 1-16, 2021 | 33 | 2021 |
| Denatured-state ensemble and the early-stage folding of the G29A mutant of the B-domain of protein A S Chowdhury, H Lei, Y Duan The Journal of Physical Chemistry B 109 (18), 9073-9081, 2005 | 29 | 2005 |
| Novel mutations in the antifolate drug resistance marker genes among Plasmodium vivax isolates exhibiting severe manifestations S Garg, V Saxena, V Lumb, D Pakalapati, PA Boopathi, AK Subudhi, ... Experimental Parasitology 132 (4), 410-416, 2012 | 25 | 2012 |
| Effect of coordinated ions on structure and flexibility of parallel G-quadruplexes: a molecular dynamics study S Chowdhury, M Bansal Journal of Biomolecular Structure and Dynamics 17 (6), 11-28, 2000 | 25 | 2000 |
| Autophagy regulated by gain of function mutant p53 enhances proteasomal inhibitor‐mediated cell death through induction of ROS and ERK in lung cancer cells H Saini, I Hakeem, S Mukherjee, S Chowdhury, R Chowdhury Journal of oncology 2019 (1), 6164807, 2019 | 24 | 2019 |
| A nanosecond molecular dynamics study of antiparallel d (G) 7 quadruplex structures: effect of the coordinated cations S Chowdhury, M Bansal Journal of Biomolecular Structure and Dynamics 18 (5), 647-669, 2001 | 23 | 2001 |
| Secondary and tertiary structure prediction of proteins: a bioinformatic approach M Kesheri, S Kanchan, S Chowdhury, RP Sinha Complex System Modelling and Control Through Intelligent Soft Computations …, 2015 | 20 | 2015 |
| Silver nanoparticle-induced alteration of mitochondrial and ER homeostasis affects human breast cancer cell fate S Dey, L Fageria, A Sharma, S Mukherjee, S Pande, R Chowdhury, ... Toxicology Reports 9, 1977-1984, 2022 | 17 | 2022 |
| Refined template selection and combination algorithm significantly improves template-based modeling accuracy A Runthala, S Chowdhury Journal of Bioinformatics and Computational Biology 17 (02), 1950006, 2019 | 17 | 2019 |
| Interleukin-6 induced proliferation is attenuated by transforming growth factor-β-induced signaling in human hepatocellular carcinoma cells A Srivastava, H Sharma, S Khanna, T Sadhu Balasundaram, ... Frontiers in Oncology 11, 811941, 2022 | 16 | 2022 |
| Transcriptomic analysis associated with reversal of cisplatin sensitivity in drug resistant osteosarcoma cells after a drug holiday D Niveditha, H Sharma, S Majumder, S Mukherjee, R Chowdhury, ... Bmc Cancer 19, 1-14, 2019 | 15 | 2019 |
