Follow
Amit Kumar Gupta
Amit Kumar Gupta
Postdoctoral Fellow at Genomic Medicine Institute, Cleveland Clinic
Verified email at ccf.org
Title
Cited by
Cited by
Year
Prediction and analysis of quorum sensing peptides based on sequence features
A Rajput, AK Gupta, M Kumar
PLoS One 10 (3), e0120066, 2015
902015
ZikaVR: an integrated Zika virus resource for genomics, proteomics, phylogenetic and therapeutic analysis
AK Gupta, K Kaur, A Rajput, SK Dhanda, M Sehgal, MS Khan, I Monga, ...
Scientific reports 6 (1), 32713, 2016
612016
ge-CRISPR-An integrated pipeline for the prediction and analysis of sgRNAs genome editing efficiency for CRISPR/Cas system
K Kaur, AK Gupta, A Rajput, M Kumar
Scientific reports 6 (1), 30870, 2016
512016
CrisprGE: a central hub of CRISPR/Cas-based genome editing
K Kaur, H Tandon, AK Gupta, M Kumar
Database 2015, bav055, 2015
432015
HPVbase–a knowledgebase of viral integrations, methylation patterns and microRNAs aberrant expression: As potential biomarkers for Human papillomaviruses mediated carcinomas
A Kumar Gupta, M Kumar
Scientific reports 5 (1), 12522, 2015
272015
CoronaVR: a computational resource and analysis of epitopes and therapeutics for severe acute respiratory syndrome coronavirus-2
AK Gupta, MS Khan, S Choudhury, A Mukhopadhyay, Sakshi, A Rastogi, ...
Frontiers in Microbiology 11, 1858, 2020
222020
SMEpred workbench: a web server for predicting efficacy of chemicallymodified siRNAs
SA Dar, AK Gupta, A Thakur, M Kumar
RNA biology 13 (11), 1144-1151, 2016
202016
ASPsiRNA: a resource of ASP-siRNAs having therapeutic potential for human genetic disorders and algorithm for prediction of their inhibitory efficacy
I Monga, A Qureshi, N Thakur, AK Gupta, M Kumar
G3: Genes, Genomes, Genetics 7 (9), 2931-2943, 2017
192017
Abundance and diversity of phages, microbial taxa, and antibiotic resistance genes in the sediments of the River Ganges through metagenomic approach
N Kumar, AK Gupta, SK Sudan, D Pal, V Randhawa, G Sahni, S Mayilraj, ...
Microbial Drug Resistance 27 (10), 1336-1354, 2021
102021
NipahVR: a resource of multi-targeted putative therapeutics and epitopes for the Nipah virus
AK Gupta, A Kumar, A Rajput, K Kaur, SA Dar, A Thakur, K Megha, ...
Database 2020, baz159, 2020
82020
Benchmarking and Assessment of Eight De Novo Genome Assemblers on Viral Next-Generation Sequencing Data, Including the SARS-CoV-2
AK Gupta, M Kumar
OMICS: A Journal of Integrative Biology 26 (7), 372-381, 2022
72022
An integrative approach toward identification and analysis of therapeutic targets involved in HPV pathogenesis with a focus on carcinomas
AK Gupta, M Kumar
Cancer Biomarkers 36 (1), 31-52, 2023
32023
HPVomics: An integrated resource for the human papillomavirus epitome and therapeutics
AK Gupta, M Kumar
Genomics 112 (6), 4853-4862, 2020
32020
ViralEpi v1.0: a high-throughput spectrum of viral epigenomic methylation profiles from diverse diseases
MS Khan, AK Gupta, M Kumar
Epigenomics 8 (1), 67-75, 2016
32016
HPV integration associated genome-wide disruption –A functional and network analysis
AK Gupta, M Kumar
Proceedings of NextGen Genomics, Biology and Bioinformatics and Technologies …, 2016
12016
Sildenafil as a Candidate Drug for Alzheimer’s Disease: Real-World Patient Data Observation and Mechanistic Observations from Patient-Induced Pluripotent Stem Cell-Derived Neurons
D Gohel, P Zhang, AK Gupta, Y Li, CW Chiang, L Li, Y Hou, AA Pieper, ...
Journal of Alzheimer's Disease, 1-15, 2024
2024
Network-Based Metabolomic and Transcriptomic Analyses Identify Impaired Bcaa Catabolism Associated with Chemotherapy-Induced Heart Failure
JC Lal, Y Huang, X Yu, Z Han, Y Hou, AK Gupta, Y Zhou, M Hussein, ...
Available at SSRN 4725067, 2024
2024
Designing of multiple diagnostic primers for severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) Omicron variant (B. 1.1. 529/BA)
AK Gupta, M Kumar
2022
Landscape of HPV mediated events as potential biomarkers in diverse carcinomas
AK Gupta, M Kumar
Proceedings of VIROCON, XXIV National Conference of Indian Virological Society, 2015
2015
The system can't perform the operation now. Try again later.
Articles 1–19