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Sivakumar Prasanth Kumar
Sivakumar Prasanth Kumar
Verified email at stjude.org - Homepage
Title
Cited by
Cited by
Year
Identification of potential inhibitors of coronavirus hemagglutinin-esterase using molecular docking, molecular dynamics simulation and binding free energy calculation
CN Patel, SP Kumar, HA Pandya, RM Rawal
Molecular Diversity 25, 421-433, 2021
352021
Identification of antiviral phytochemicals as a potential SARS-CoV-2 main protease (Mpro) inhibitor using docking and molecular dynamics simulations
CN Patel, SP Jani, DG Jaiswal, SP Kumar, N Mangukia, RM Parmar, ...
Scientific Reports 11 (1), 20295, 2021
342021
Design, Synthesis, Biological Evaluation, and Molecular Modeling of Coumarin–P iperazine Derivatives as Acetylcholinesterase Inhibitors
RP Modh, SP Kumar, YT Jasrai, KH Chikhalia
Archiv der Pharmazie 346 (11), 793-804, 2013
342013
Evolutionary and molecular aspects of Indian tomato leaf curl virus coat protein
SP Kumar, SK Patel, RG Kapopara, YT Jasrai, HA Pandya
International journal of plant genomics 2012, 2012
302012
Effect of p-sulfonatocalix [4] resorcinarene (PSC [4] R) on the solubility and bioavailability of a poorly water soluble drug lamotrigine (LMN) and computational investigation
MB Patel, NN Valand, NR Modi, KV Joshi, U Harikrishnan, SP Kumar, ...
RSC advances 3 (36), 15971-15981, 2013
242013
The effect of various atomic partial charge schemes to elucidate consensus activity-correlating molecular regions: a test case of diverse QSAR models
SP Kumar, PC Jha, YT Jasrai, HA Pandya
Journal of Biomolecular Structure and Dynamics 34 (3), 540-559, 2016
232016
Synthesis and biological evaluation of cationic fullerene quinazolinone conjugates and their binding mode with modeled Mycobacterium tuberculosis hypoxanthine …
MB Patel, SP Kumar, NN Valand, YT Jasrai, SK Menon
Journal of molecular modeling 19, 3201-3217, 2013
232013
Epitope-based immunoinformatics and molecular docking studies of nucleocapsid protein and ovarian tumor domain of crimean–congo hemorrhagic Fever virus
P Srinivasan, SP Kumar, M Karthikeyan, J Jeyakanthan, YT Jasrai, ...
Frontiers in Genetics 2, 72, 2011
232011
Cardiotonic steroids as potential Na+/K+-ATPase inhibitors – a computational study
CN Patel, SP Kumar, KM Modi, MN Soni, NR Modi, HA Pandya
Journal of Receptors and Signal Transduction, 2019
212019
Prioritization of active antimalarials using structural interaction profile of Plasmodium falciparum enoyl-acyl carrier protein reductase (PfENR)-triclosan derivatives
SP Kumar, LB George, YT Jasrai, HA Pandya
SAR and QSAR in Environmental Research 26 (1), 61-77, 2015
202015
A multiparametric organ toxicity predictor for drug discovery
CN Patel, SP Kumar, RM Rawal, DP Patel, FJ Gonzalez, HA Pandya
Toxicology Mechanisms and Methods, 2019
192019
Energetic contributions of amino acid residues and its cross‐talk to delineate ligand‐binding mechanism
SP Kumar, CN Patel, RM Rawal, HA Pandya
Proteins: Structure, Function, and Bioinformatics 88 (9), 1207-1225, 2020
182020
Receptor-guided de novo design of dengue envelope protein inhibitors
VH Desai, SP Kumar, HA Pandya, HA Solanki
Applied biochemistry and biotechnology 177, 861-878, 2015
182015
Repurposing of anticancer phytochemicals for identifying potential fusion inhibitor for SARS-CoV-2 using molecular docking and molecular dynamics (MD) simulations
CN Patel, D Goswami, PK Sivakumar, HA Pandya
Journal of Biomolecular Structure and Dynamics 40 (17), 7744-7761, 2022
162022
Molecular dynamics-assisted pharmacophore modeling of caspase-3-isatin sulfonamide complex: Recognizing essential intermolecular contacts and features of sulfonamide inhibitor …
SP Kumar, CN Patel, PC Jha, HA Pandya
Computational biology and chemistry 71, 117-128, 2017
162017
Compound prioritization from inverse docking experiment using receptor‐centric and ligand‐centric methods: a case study on Plasmodium falciparum Fab enzymes
SP Kumar, HA Pandya, VH Desai, YT Jasrai
Journal of Molecular Recognition 27 (4), 215-229, 2014
162014
Computational investigation of natural compounds as potential main protease (Mpro) inhibitors for SARS-CoV-2 virus
CN Patel, SP Jani, SP Kumar, KM Modi, Y Kumar
Computers in Biology and Medicine 151, 106318, 2022
152022
Receptor pharmacophore ensemble (REPHARMBLE): a probabilistic pharmacophore modeling approach using multiple protein-ligand complexes
SP Kumar
Journal of Molecular Modeling 24 (10), 282, 2018
152018
Exploration of interaction zones of β-tubulin colchicine binding domain of helminths and binding mechanism of anthelmintics
P Ranjan, SP Kumar, V Kari, PC Jha
Computational Biology and Chemistry 68, 78-91, 2017
152017
Multi-level structure-based pharmacophore modelling of caspase-3-non-peptide complexes: Extracting essential pharmacophore features and its application to virtual screening
SP Kumar, PC Jha
Chemico-Biological Interactions 254, 207-220, 2016
152016
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