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Debananda Das
Debananda Das
Verified email at mail.nih.gov
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Optimization of quantum mechanical molecular mechanical partitioning schemes: Gaussian delocalization of molecular mechanical charges and the double link atom method
D Das, KP Eurenius, EM Billings, P Sherwood, DC Chatfield, M Hodošček, ...
The Journal of chemical physics 117 (23), 10534-10547, 2002
2352002
Structural and molecular interactions of CCR5 inhibitors with CCR5
K Maeda, D Das, H Ogata-Aoki, H Nakata, T Miyakawa, Y Tojo, R Norman, ...
Journal of Biological Chemistry 281 (18), 12688-12698, 2006
2062006
Elevated expression of matrix metalloproteinase-9 and inflammatory cytokines in keratoconus patients is inhibited by cyclosporine A
R Shetty, A Ghosh, RR Lim, M Subramani, K Mihir, A Ranganath, ...
Investigative ophthalmology & visual science 56 (2), 738-750, 2015
2042015
Structure-based design of novel HIV-1 protease inhibitors to combat drug resistance
AK Ghosh, PR Sridhar, S Leshchenko, AK Hussain, J Li, AY Kovalevsky, ...
Journal of medicinal chemistry 49 (17), 5252-5261, 2006
1702006
Potent inhibition of HIV-1 replication by novel non-peptidyl small molecule inhibitors of protease dimerization
Y Koh, S Matsumi, D Das, M Amano, DA Davis, J Li, S Leschenko, ...
Journal of biological chemistry 282 (39), 28709-28720, 2007
1692007
A small molecule compound with an indole moiety inhibits the main protease of SARS-CoV-2 and blocks virus replication
S Hattori, N Higashi-Kuwata, H Hayashi, SR Allu, J Raghavaiah, H Bulut, ...
Nature Communications 12 (1), 668, 2021
1492021
Cancer stem cells and field cancerization of oral squamous cell carcinoma
M Simple, A Suresh, D Das, MA Kuriakose
Oral oncology 51 (7), 643-651, 2015
1322015
Kinetics of phenol degradation using Pseudomonas putida MTCC 1194
K Bandyopadhyay, D Das, BR Maiti
Bioprocess Engineering 18, 373-377, 1998
1301998
Nanostructured scaffold as a determinant of stem cell fate
L Krishna, K Dhamodaran, C Jayadev, K Chatterjee, R Shetty, SS Khora, ...
Stem Cell Research & Therapy 7, 1-12, 2016
1252016
Hypertension with elevated levels of oxidized low‐density lipoprotein and anticardiolipin antibody in the circulation of premenopausal Indian women chronically exposed to …
A Dutta, B Mukherjee, D Das, A Banerjee, MR Ray
Indoor air 21 (2), 165-176, 2011
1112011
NucleiSegNet: Robust deep learning architecture for the nuclei segmentation of liver cancer histopathology images
S Lal, D Das, K Alabhya, A Kanfade, A Kumar, J Kini
Computers in Biology and Medicine 128, 104075, 2021
1082021
Retinal pigment epithelium-secretome: A diabetic retinopathy perspective
M Ponnalagu, M Subramani, C Jayadev, R Shetty, D Das
Cytokine 95, 126-135, 2017
1042017
In Vitro Selection of Highly Darunavir-Resistant and Replication-Competent HIV-1 Variants by Using a Mixture of Clinical HIV-1 Isolates Resistant to Multiple …
Y Koh, M Amano, T Towata, M Danish, S Leshchenko-Yashchuk, D Das, ...
Journal of Virology 84 (22), 11961-11969, 2010
972010
Mathematical model for evaluation of mass transfer limitations in phenol biodegradation by immobilized Pseudomonas putida
I Banerjee, JM Modak, K Bandopadhyay, D Das, BR Maiti
Journal of Biotechnology 87 (3), 211-223, 2001
942001
Status of pumped hydro-storage schemes and its future in India
N Sivakumar, D Das, NP Padhy, ARS Kumar, N Bisoyi
Renewable and Sustainable Energy Reviews 19, 208-213, 2013
922013
Control of Notch-ligand endocytosis by ligand-receptor interaction
EM Hansson, F Lanner, D Das, A Mutvei, U Marklund, J Ericson, ...
Journal of cell science 123 (17), 2931-2942, 2010
892010
Prediction of potency of protease inhibitors using free energy simulations with polarizable quantum mechanics-based ligand charges and a hybrid water model
D Das, Y Koh, Y Tojo, AK Ghosh, H Mitsuya
Journal of Chemical Information and Modeling 49 (12), 2851-2862, 2009
872009
Discovery and development of anti-HIV therapeutic agents: progress towards improved HIV medication
K Maeda, D Das, T Kobayakawa, H Tamamura, H Takeuchi
Current Topics in Medicinal Chemistry 19 (18), 1621-1649, 2019
842019
A novel bis-tetrahydrofuranylurethane-containing nonpeptidic protease inhibitor (PI), GRL-98065, is potent against multiple-PI-resistant human immunodeficiency virus in vitro
M Amano, Y Koh, D Das, J Li, S Leschenko, YF Wang, PI Boross, ...
Antimicrobial agents and chemotherapy 51 (6), 2143-2155, 2007
832007
Dimerization of HIV-1 protease occurs through two steps relating to the mechanism of protease dimerization inhibition by darunavir
H Hayashi, N Takamune, T Nirasawa, M Aoki, Y Morishita, D Das, Y Koh, ...
Proceedings of the National Academy of Sciences 111 (33), 12234-12239, 2014
822014
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Articles 1–20