| DOMINE: a comprehensive collection of known and predicted domain-domain interactions S Yellaboina, A Tasneem, DV Zaykin, B Raghavachari, R Jothi Nucleic acids research 39 (suppl_1), D730-D735, 2011 | 209 | 2011 |
| Histone-fold domain protein NF-Y promotes chromatin accessibility for cell type-specific master transcription factors AJ Oldfield, P Yang, AE Conway, S Cinghu, JM Freudenberg, ... Molecular cell 55 (5), 708-722, 2014 | 198 | 2014 |
| Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity JM Freudenberg, S Ghosh, BL Lackford, S Yellaboina, X Zheng, R Li, ... Nucleic acids research 40 (8), 3364-3377, 2012 | 108 | 2012 |
| Computational prediction and experimental verification of novel IdeR binding sites in the upstream sequences of Mycobacterium tuberculosis open reading frames P Prakash, S Yellaboina, A Ranjan, SE Hasnain Bioinformatics 21 (10), 2161-2166, 2005 | 73 | 2005 |
| Inferring genome-wide functional linkages in E. coli by combining improved genome context methods: comparison with high-throughput experimental data S Yellaboina, K Goyal, SC Mande Genome research 17 (4), 527-535, 2007 | 68 | 2007 |
| PredictRegulon: a web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes S Yellaboina, J Seshadri, MS Kumar, A Ranjan Nucleic acids research 32 (suppl 2), W318-W320, 2004 | 60 | 2004 |
| Genome scale portrait of cAMP-receptor protein (CRP) regulons in mycobacteria points to their role in pathogenesis Y Akhter, S Yellaboina, A Farhana, A Ranjan, N Ahmed, SE Hasnain Gene 407 (1-2), 148-158, 2008 | 52 | 2008 |
| Prediction of DtxR regulon: identification of binding sites and operons controlled by Diphtheria toxin repressor in Corynebacterium diphtheriae S Yellaboina, S Ranjan, P Chakhaiyar, S Hasnain, A Ranjan BMC microbiology 4 (1), 38, 2004 | 50 | 2004 |
| Prediction of evolutionarily conserved interologs in Mus musculus S Yellaboina, DB Dudekula, MSH Ko BMC genomics 9, 1-9, 2008 | 35 | 2008 |
| Comparative analysis of iron regulated genes in mycobacteria S Yellaboina, S Ranjan, V Vindal, A Ranjan FEBS letters 580 (11), 2567-2576, 2006 | 33 | 2006 |
| Comparing transcription rate and mRNA abundance as parameters for biochemical pathway and network analysis B Hayles, S Yellaboina, D Wang PloS one 5 (3), e9908, 2010 | 29 | 2010 |
| Comprehensive profiling of transcriptional networks specific for lactogenic differentiation of HC11 mammary epithelial stem-like cells TR Sornapudi, R Nayak, PK Guthikonda, AK Pasupulati, S Kethavath, ... Scientific Reports 8 (1), 11777, 2018 | 28 | 2018 |
| Integrative framework for identification of key cell identity genes uncovers determinants of ES cell identity and homeostasis S Cinghu, S Yellaboina, JM Freudenberg, S Ghosh, X Zheng, AJ Oldfield, ... Proceedings of the National Academy of Sciences 111 (16), E1581-E1590, 2014 | 28 | 2014 |
| System-wide coordinates of higher order functions in host-pathogen environment upon Mycobacterium tuberculosis infection PV Parvati Sai Arun, SK Miryala, A Rana, S Kurukuti, Y Akhter, ... Scientific Reports 8 (1), 5079, 2018 | 17 | 2018 |
| Inhibitors of apoptosis protein antagonists (Smac mimetic compounds) control polarization of macrophages during microbial challenge and sterile inflammatory responses V Nadella, A Mohanty, L Sharma, S Yellaboina, HJ Mollenkopf, ... Frontiers in immunology 8, 1792, 2018 | 17 | 2018 |
| IdeR in mycobacteria: from target recognition to physiological function S Ranjan, S Yellaboina, A Ranjan Critical reviews in microbiology 32 (2), 69-75, 2006 | 17 | 2006 |
| Identification and functional analysis of essential, conserved, housekeeping and duplicated genes PVPS Arun, SK Miryala, S Chattopadhyay, K Thiyyagura, P Bawa, ... FEBS letters 590 (10), 1428-1437, 2016 | 16 | 2016 |
| Comparative transcriptome profiling of pomegranate genotypes having resistance and susceptible reaction to Xanthomonas axonopodis pv. punicae NV Singh, S Parashuram, J Sharma, RS Potlannagari, DB Karuppannan, ... Saudi Journal of Biological Sciences 27 (12), 3514-3528, 2020 | 11 | 2020 |
| Metabolic remodeling in Escherichia coli MG1655. A prophage e14‐encoded small RNA, co293, post‐transcriptionally regulates transcription factors HcaR and … AK Madikonda, A Shaikh, S Khanra, H Yakkala, S Yellaboina, S Lin‐Chao, ... The FEBS journal 287 (21), 4767-4782, 2020 | 6 | 2020 |
| iCR: a web tool to identify conserved targets of a regulatory protein across the multiple related prokaryotic species S Ranjan, J Seshadri, V Vindal, S Yellaboina, A Ranjan Nucleic acids research 34 (suppl_2), W584-W587, 2006 | 5 | 2006 |
Akash RanjanStaff Scientist VII (Chief Scientist) and Head Computational & Functional Genomics, ComputationalVerified email at cdfd.org.in
