Athi N Naganathan

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Victor MuñozUniversity of California MercedVerified email at ucmerced.edu
Soundhararajan GopiPost-doctoral Researcher, University of ZürichVerified email at bioc.uzh.ch
Jose M. Sanchez-RuizUniversidad de Granada (Spain)Verified email at ugr.es
Abhishek NarayanPost Doctoral FellowVerified email at ualberta.ca
Sneha MunshiPostdoctoral FellowVerified email at ualberta.ca
Nandakumar RajasekaranPostdoctoral fellow, Johns Hopkins UniversityVerified email at jh.edu
Ashok SekharAssistant Professor, Indian Institute of Science Bangalore, IndiaVerified email at iisc.ac.in
Angel Luis PeyAssociate Professor, Department of Physical Chemistry, Universidad de Granada (Spain)Verified email at ugr.es
Adithi KannanResearch Scholar, Indian Institute of Technology, MadrasVerified email at smail.iitm.ac.in
Modesto OrozcoProfessor of Biochemistry, Universtity of Barcelona and Group Leader IRB BarcelonaVerified email at irbbarcelona.org
Raul Perez-JimenezProfessor at CIC bioGUNEVerified email at cicbiogune.es
Luis Alberto Campos PrietoResearch collaborator, IMDEA nanociencia, Madrid, SpainVerified email at imdea.org
Urmi DoshiSenior Research AssociateVerified email at gsu.edu
Divya RajendranIndian Institute of Technology, MadrasVerified email at smail.iitm.ac.in
Sayan RanuIIT DelhiVerified email at iitd.ac.in
Petr ManInstitute of MicrobiologyVerified email at biomed.cas.cz
Mourad SadqiProject Scientist, University of California, Merced, USAVerified email at ucmerced.edu
Kabita BhattacharjeeResearch scholar, IIT-Madras, Tamil Nadu- IndiaVerified email at smail.iitm.ac.in
B Ibarra-MoleroUniversidad de GranadaVerified email at ugr.es
Bincy LukoseResearch Scholar, IIT MadrasVerified email at smail.iitm.ac.in

Athi N Naganathan

Professor, Indian Institute of Technology Madras, Chennai, India

Verified email at iitm.ac.in - Homepage

Protein Structure-Function-Folding Statistical Models Molecular Simulations Spectroscopy


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Scaling of folding times with protein size AN Naganathan, V Muñoz Journal of the American Chemical Society 127 (2), 480-481, 2005	208	2005
Protein folding kinetics: Barrier effects in chemical and thermal denaturation experiments AN Naganathan, U Doshi, V Muñoz Journal of the American Chemical Society 129 (17), 5673-5682, 2007	134	2007
Insights into protein folding mechanisms from large scale analysis of mutational effects AN Naganathan, V Muñoz Proceedings of the National Academy of Sciences 107 (19), 8611-8616, 2010	117	2010
Dynamics, energetics, and structure in protein folding AN Naganathan, U Doshi, A Fung, M Sadqi, V Muñoz Biochemistry 45 (28), 8466-8475, 2006	105	2006
Robustness of downhill folding: guidelines for the analysis of equilibrium folding experiments on small proteins AN Naganathan, R Perez-Jimenez, JM Sanchez-Ruiz, V Munoz Biochemistry 44 (20), 7435-7449, 2005	99	2005
Dynamics of one-state downhill protein folding P Li, FY Oliva, AN Naganathan, V Muñoz Proceedings of the National Academy of Sciences 106 (1), 103-108, 2009	97	2009
Modulation of allosteric coupling by mutations: from protein dynamics and packing to altered native ensembles and function AN Naganathan Current opinion in structural biology 54, 1-9, 2019	89	2019
Direct measurement of barrier heights in protein folding AN Naganathan, JM Sanchez-Ruiz, V Muñoz Journal of the American Chemical Society 127 (51), 17970-17971, 2005	87	2005
Modern analysis of protein folding by differential scanning calorimetry B Ibarra-Molero, AN Naganathan, JM Sanchez-Ruiz, V Muñoz Methods in enzymology 567, 281-318, 2016	79	2016
The native ensemble and folding of a protein molten-globule: functional consequence of downhill folding AN Naganathan, M Orozco Journal of the American Chemical Society 133 (31), 12154-12161, 2011	69	2011
A general mechanism for the propagation of mutational effects in proteins N Rajasekaran, S Suresh, S Gopi, K Raman, AN Naganathan Biochemistry 56 (1), 294-305, 2017	59	2017
Predictions from an Ising-like statistical mechanical model on the dynamic and thermodynamic effects of protein surface electrostatics AN Naganathan Journal of chemical theory and computation 8 (11), 4646-4656, 2012	57	2012
Quantitative prediction of protein folding behaviors from a simple statistical model P Bruscolini, AN Naganathan Journal of the American Chemical Society 133 (14), 5372-5379, 2011	48	2011
A universal pattern in the percolation and dissipation of protein structural perturbations N Rajasekaran, A Sekhar, AN Naganathan The journal of physical chemistry letters 8 (19), 4779-4784, 2017	44	2017
Direct observation of downhill folding of λ-repressor in a microfluidic mixer SJ DeCamp, AN Naganathan, SA Waldauer, O Bakajin, LJ Lapidus Biophysical Journal 97 (6), 1772-1777, 2009	41	2009
Thermally versus chemically denatured protein states A Narayan, K Bhattacharjee, AN Naganathan Biochemistry 58 (21), 2519-2523, 2019	39	2019
Coarse-grained representation of protein flexibility. Foundations, successes, and shortcomings M Orozco, L Orellana, A Hospital, AN Naganathan, A Emperador, ... Advances in Protein Chemistry and Structural Biology 85, 183-215, 2011	39	2011
Navigating the downhill protein folding regime via structural homologues AN Naganathan, P Li, R Perez-Jimenez, JM Sanchez-Ruiz, V Munoz Journal of the American Chemical Society 132 (32), 11183-11190, 2010	39	2010
Thermodynamics of downhill folding: multi-probe analysis of PDD, a protein that folds over a marginal free energy barrier AN Naganathan, V Muñoz The Journal of Physical Chemistry B 118 (30), 8982-8994, 2014	38	2014
Insight into the specificity and severity of pathogenic mechanisms associated with missense mutations through experimental and structural perturbation analyses E Medina-Carmona, I Betancor-Fernández, J Santos, N Mesa-Torres, ... Human Molecular Genetics 28 (1), 1-15, 2019	34	2019

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