Sandeep Kumar Dhanda

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Gajendra PS RaghavaIndraprastha Institute of Information Technology, IIIT-Delhi , IndiaVerified email at iiitd.ac.in
Alessandro SetteVerified email at liai.org
Bjoern PetersProfessor at La Jolla Institute for ImmunologyVerified email at lji.org
Swapnil MahajanCo-founder & Director, DeepKnomicsVerified email at deepknomics.com
Sinu PaulBioinformatics Scientist, La Jolla Institute for ImmunologyVerified email at lji.org
Kumardeep ChaudharyCSIR-Institute of Genomics & Integrative Biology (IGIB)Verified email at igib.res.in
Sudheer GuptaAll India Institute of Medical Sciences (AIIMS) BhopalVerified email at aiimsbhopal.edu.in
Alba GrifoniLa Jolla Institute for immunologyVerified email at lji.org
Salman Sadullah UsmaniResearch Associate-I, IIIT-DelhiVerified email at imtech.res.in
John SidneyLa Jolla Institute for AllergyVerified email at lji.org
Deepak SinglaSchool of Agricultural Biotechnology, Punjab Agricultural University, LudhianaVerified email at pau.edu
Pooja VirScientist, USU, HJFVerified email at usuhs.edu
James A. OvertonKnoceanVerified email at overton.ca
sandeep singhResearch Associate at University of VirginiaVerified email at virginia.edu
Daniela WeiskopfLa Jolla Institute for ImmunologyVerified email at lji.org
Morten NielsenDepartment of Health Technology, The Technical University ofVerified email at cbs.dtu.dk
Rahul KumarIndian Institute of Science (IISc), BengaluruVerified email at iisc.ac.in
Piyush AgrawalVisiting Postdoctoral Fellow, NCI, NIHVerified email at nih.gov
Massimo AndreattaLudwig Institute for Cancer Research, LausanneVerified email at unil.ch
Samir K BrahmachariJ. C Bose National Fellow, Founder Director , CSIR-IGIB and Former Director General, CSIR IndiaVerified email at igib.in

Sandeep Kumar Dhanda

St. Jude Children's Research Hospital

Verified email at stjude.org - Homepage

Bioinformatics Immunology Oncology


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The Immune Epitope Database (IEDB): 2018 update R Vita, S Mahajan, JA Overton, SK Dhanda, S Martini, JR Cantrell, ... Nucleic Acids Research 47 (D1), D339-D343, 2019	489	2019
Designing of interferon-gamma inducing MHC class-II binders SK Dhanda, P Vir, GPS Raghava Biology direct 8 (1), 30, 2013	209	2013
The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine Design W Fleri, S Paul, SK Dhanda, S Mahajan, X Xu, B Peters, A Sette Frontiers in Immunology 8, 278, 2017	178	2017
Prediction of IL4 inducing peptides SK Dhanda, S Gupta, P Vir, GPS Raghava Clinical and Developmental Immunology 2013, 2013	100	2013
IEDB-AR: immune epitope database—analysis resource in 2019 SK Dhanda, S Mahajan, S Paul, Z Yan, H Kim, MC Jespersen, V Jurtz, ... Nucleic acids research 47 (W1), W502-W506, 2019	94	2019
SATPdb: a database of structurally annotated therapeutic peptides S Singh, K Chaudhary, SK Dhanda, S Bhalla, SS Usmani, A Gautam, ... Nucleic Acids Research 44 (D1), D1119–D1126, 2015	80	2015
Computer-aided designing of immunosuppressive peptides based on IL-10 inducing potential G Nagpal#, SS Usmani#, SK Dhanda#, H Kaur, S Singh, M Sharma, ... Scientific Reports 7, 42851, 2017	79	2017
Novel in silico tools for designing peptide-based subunit vaccines and immunotherapeutics SK Dhanda, SS Usmani, P Agrawal, G Nagpal, A Gautam, GPS Raghava Briefings in bioinformatics 18 (3), 467-478, 2017	66	2017
ZikaVR: An Integrated Zika Virus Resource for Genomics, Proteomics, Phylogenetic and Therapeutic Analysis AK Gupta#, K Kaur#, A Rajput#, SK Dhanda#, M Sehgal#, MS Khan#, ... Scientific Reports 6, 32713, 2016	52	2016
Predicting HLA CD4 immunogenicity in human populations SK Dhanda, E Karosiene, L Edwards, A Grifoni, S Paul, M Andreatta, ... Frontiers in Immunology 9, 1369, 2018	43	2018
ProCarDB: a database of bacterial carotenoids LNU Nupur, A Vats, SK Dhanda, GPS Raghava, AK Pinnaka, A Kumar BMC microbiology 16 (1), 1-8, 2016	41	2016
Prioritization of anticancer drugs against a cancer using genomic features of cancer cells: A step towards personalized medicine S Gupta, K Chaudhary, R Kumar, A Gautam, JS Nanda, SK Dhanda, ... Scientific reports 6, 23857, 2016	39	2016
DrugMint: a webserver for predicting and designing of drug-like molecules SK Dhanda, D Singla, AK Mondal, GPS Raghava Biology Direct 8 (1), 1-12, 2013	34	2013
Development of a novel clustering tool for linear peptide sequences SK Dhanda*, K Vaughan, V Schulten, A Grifoni, D Weiskopf, J Sidney, ... Immunology 155 (3), 331-345, 2018	33	2018
QSAR-based models for designing quinazoline/imidazothiazoles/pyrazolopyrimidines based inhibitors against wild and mutant EGFR JS Chauhan, SK Dhanda, D Singla, SM Agarwal, GPS Raghava, ... PloS one 9 (7), e101079, 2014	31	2014
Determination of a predictive cleavage motif for eluted major histocompatibility complex class II ligands S Paul, E Karosiene, SK Dhanda, V Jurtz, L Edwards, M Nielsen, A Sette, ... Frontiers in immunology 9, 1795, 2018	27	2018
Open source software and web services for designing therapeutic molecules D Singla, SK Dhanda, JS Chauhan, A Bhardwaj, SK Brahmachari, ... Current topics in medicinal chemistry 13 (10), 1172-1191, 2013	24	2013
ImmunomeBrowser: a tool to aggregate and visualize complex and heterogeneous epitopes in reference proteins SK Dhanda*, R Vita, B Ha, A Grifoni, B Peters, A Sette Bioinformatics 34 (22), 3931-3933, 2018	18	2018
Prediction of Immunomodulatory potential of an RNA sequence for designing non-toxic siRNAs and RNA-based vaccine adjuvants K Chaudhary, G Nagpal, SK Dhanda, GPS Raghava Scientific Reports 6, 20678, 2016	18	2016
VaccineDA: Prediction, design and genome-wide screening of oligodeoxynucleotide-based vaccine adjuvants G Nagpal#, S Gupta#, K Chaudhary#, SK Dhanda#, S Prakash, ... Scientific reports 5, 12478, 2015	18	2015

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