Sandeep Kumar Dhanda

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Gajendra PS RaghavaIndraprastha Institute of Information Technology, IIIT-Delhi , IndiaVerified email at iiitd.ac.in
Alessandro SetteVerified email at liai.org
Bjoern PetersProfessor at La Jolla Institute for ImmunologyVerified email at lji.org
Swapnil MahajanCo-founder & Director, DeepKnomicsVerified email at deepknomics.com
Sinu PaulBioinformatics Scientist, Rancho BiosciencesVerified email at ranchobiosciences.com
Sudheer Gupta3B Blackbio Biotech India Ltd.Verified email at 3bblackbio.com
Kumardeep ChaudharyCSIR-Institute of Genomics & Integrative Biology (IGIB)Verified email at igib.res.in
Alba GrifoniLa jolla Institute for ImmunologyVerified email at lji.org
John SidneyLa Jolla Institute for AllergyVerified email at lji.org
Pooja VirScientist, USU, HJFVerified email at usuhs.edu
James A. OvertonKnoceanVerified email at overton.ca
sandeep singhResearch Associate at University of VirginiaVerified email at virginia.edu
Morten NielsenDepartment of Health Technology, The Technical University ofVerified email at cbs.dtu.dk
Daniela WeiskopfLa Jolla Institute for ImmunologyVerified email at lji.org
Deepak SinglaSchool of Agricultural Biotechnology, Punjab Agricultural University, LudhianaVerified email at pau.edu
Rahul KumarIndian Institute of Technology (IIT) HyderabadVerified email at bt.iith.ac.in
Massimo AndreattaLudwig Institute for Cancer Research, LausanneVerified email at unil.ch
Vanessa JurtzNovo Nordisk A/SVerified email at novonordisk.com
Piyush AgrawalVisiting Postdoctoral Fellow, National Cancer Institute, NIH, USAVerified email at nih.gov
Samir K BrahmachariJ. C Bose National Fellow, Founder Director , CSIR-IGIB and Former Director General, CSIR IndiaVerified email at igib.in

Sandeep Kumar Dhanda

Other namesSandeep Dhanda, Sandeep Kumar

St. Jude Children's Research Hospital

Verified email at stjude.org - Homepage

Bioinformatics Immunology Oncology


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The immune epitope database (IEDB): 2018 update R Vita, S Mahajan, JA Overton, SK Dhanda, S Martini, JR Cantrell, ... Nucleic acids research 47 (D1), D339-D343, 2019	1080	2019
Designing of interferon-gamma inducing MHC class-II binders SK Dhanda, P Vir, GPS Raghava Biology direct 8 (1), 1-15, 2013	423	2013
The immune epitope database and analysis resource in epitope discovery and synthetic vaccine design W Fleri, S Paul, SK Dhanda, S Mahajan, X Xu, B Peters, A Sette Frontiers in immunology 8, 278, 2017	324	2017
IEDB-AR: immune epitope database—analysis resource in 2019 SK Dhanda, S Mahajan, S Paul, Z Yan, H Kim, MC Jespersen, V Jurtz, ... Nucleic acids research 47 (W1), W502-W506, 2019	216	2019
Prediction of IL4 inducing peptides SK Dhanda, S Gupta, P Vir, GPS Raghava Clinical and Developmental Immunology 2013, 2013	188	2013
Computer-aided designing of immunosuppressive peptides based on IL-10 inducing potential G Nagpal, SS Usmani, SK Dhanda, H Kaur, S Singh, M Sharma, ... Scientific reports 7 (1), 42851, 2017	161	2017
SATPdb: a database of structurally annotated therapeutic peptides S Singh, K Chaudhary, SK Dhanda, S Bhalla, SS Usmani, A Gautam, ... Nucleic acids research 44 (D1), D1119-D1126, 2016	124	2016
Novel in silico tools for designing peptide-based subunit vaccines and immunotherapeutics SK Dhanda, SS Usmani, P Agrawal, G Nagpal, A Gautam, GPS Raghava Briefings in bioinformatics 18 (3), 467-478, 2017	94	2017
Predicting HLA CD4 immunogenicity in human populations SK Dhanda, E Karosiene, L Edwards, A Grifoni, S Paul, M Andreatta, ... Frontiers in immunology, 1369, 2018	72	2018
Prioritization of anticancer drugs against a cancer using genomic features of cancer cells: A step towards personalized medicine S Gupta, K Chaudhary, R Kumar, A Gautam, JS Nanda, SK Dhanda, ... Scientific reports 6 (1), 23857, 2016	65	2016
Development of a novel clustering tool for linear peptide sequences SK Dhanda, K Vaughan, V Schulten, A Grifoni, D Weiskopf, J Sidney, ... Immunology 155 (3), 331-345, 2018	58	2018
ZikaVR: an integrated Zika virus resource for genomics, proteomics, phylogenetic and therapeutic analysis AK Gupta, K Kaur, A Rajput, SK Dhanda, M Sehgal, MS Khan, I Monga, ... Scientific reports 6 (1), 32713, 2016	58	2016
ProCarDB: a database of bacterial carotenoids LNU Nupur, A Vats, SK Dhanda, GPS Raghava, AK Pinnaka, A Kumar BMC microbiology 16 (1), 1-8, 2016	55	2016
DrugMint: a webserver for predicting and designing of drug-like molecules SK Dhanda, D Singla, AK Mondal, GPS Raghava Biology Direct 8 (1), 1-12, 2013	49	2013
Determination of a predictive cleavage motif for eluted major histocompatibility complex class II ligands S Paul, E Karosiene, SK Dhanda, V Jurtz, L Edwards, M Nielsen, A Sette, ... Frontiers in Immunology 9, 1795, 2018	46	2018
T cell responses induced by attenuated flavivirus vaccination are specific and show limited cross-reactivity with other flavivirus species A Grifoni, H Voic, SK Dhanda, CK Kidd, JD Brien, S Buus, A Stryhn, ... Journal of virology 94 (10), e00089-20, 2020	41	2020
QSAR-based models for designing quinazoline/imidazothiazoles/pyrazolopyrimidines based inhibitors against wild and mutant EGFR JS Chauhan, SK Dhanda, D Singla, ... PloS one 9 (7), e101079, 2014	40	2014
ImmunomeBrowser: a tool to aggregate and visualize complex and heterogeneous epitopes in reference proteins SK Dhanda, R Vita, B Ha, A Grifoni, B Peters, A Sette Bioinformatics 34 (22), 3931-3933, 2018	31	2018
A Review on T Cell Epitopes Identified Using Prediction and Cell-Mediated Immune Models for Mycobacterium tuberculosis and Bordetella pertussis Y Tian, R da Silva Antunes, J Sidney, CS Lindestam Arlehamn, A Grifoni, ... Frontiers in immunology 9, 2778, 2018	30	2018
Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease MJ Mason, C Schinke, CLP Eng, F Towfic, F Gruber, A Dervan, BS White, ... Leukemia 34 (7), 1866-1874, 2020	28	2020

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