Matthew Stocks
Matthew Stocks
Verified email at uea.ac.uk
Title
Cited by
Cited by
Year
The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets
MB Stocks, S Moxon, D Mapleson, HC Woolfenden, I Mohorianu, L Folkes, ...
Bioinformatics 28 (15), 2059-2061, 2012
2642012
PAREsnip: a tool for rapid genome-wide discovery of small RNA/target interactions evidenced through degradome sequencing
L Folkes, S Moxon, HC Woolfenden, MB Stocks, G Szittya, T Dalmay, ...
Nucleic acids research 40 (13), e103-e103, 2012
872012
miRCat2: accurate prediction of plant and animal microRNAs from next-generation sequencing datasets
C Paicu, I Mohorianu, M Stocks, P Xu, A Coince, M Billmeier, T Dalmay, ...
Bioinformatics 33 (16), 2446-2454, 2017
372017
CoLIde: a bioinformatics tool for CO-expression based small RNA L oci Ide ntification using high-throughput sequencing data
I Mohorianu, MB Stocks, J Wood, T Dalmay, V Moulton
RNA biology 10 (7), 1221-1230, 2013
312013
Interacting with the biomolecular solvent accessible surface via a haptic feedback device
MB Stocks, S Hayward, SD Laycock
BMC structural biology 9 (1), 1-7, 2009
312009
Comprehensive processing of high-throughput small RNA sequencing data including quality checking, normalization, and differential expression analysis using the UEA sRNA Workbench
M Beckers, I Mohorianu, M Stocks, C Applegate, T Dalmay, V Moulton
RNA 23 (6), 823-835, 2017
242017
The UEA sRNA Workbench (version 4.4): a comprehensive suite of tools for analyzing miRNAs and sRNAs
MB Stocks, I Mohorianu, M Beckers, C Paicu, S Moxon, J Thody, ...
Bioinformatics 34 (19), 3382-3384, 2018
202018
The UEA small RNA workbench: a suite of computational tools for small RNA analysis
I Mohorianu, MB Stocks, CS Applegate, L Folkes, V Moulton
MicroRNA Detection and Target Identification, 193-224, 2017
132017
Applying forces to elastic network models of large biomolecules using a haptic feedback device
MB Stocks, SD Laycock, S Hayward
Journal of computer-aided molecular design 25 (3), 203-211, 2011
112011
Processing large-scale small RNA datasets in silico
D Mapleson, I Mohorianu, H Pais, MB Stocks, L Folkes, V Moulton
Next Generation Sequencing: Technology and Applications, 2014
22014
Navigation and exploration of large data-sets using a haptic feedback device
SD Laycock, MB Stocks, S Hayward
ACM SIGGRAPH 2010 Posters, 1-1, 2010
22010
A haptic rendering algorithm for molecular interaction
MB Stocks, SD Laycock
Proceedings of the First Eurographics conference on Visual Computing for …, 2008
22008
Interacting with biomolecules using haptic feedback
MB Stocks
University of East Anglia, 2010
2010
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Articles 1–13