Sandra Castillo
Sandra Castillo
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MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
T Pluskal, S Castillo, A Villar-Briones, M Orešič
BMC bioinformatics 11 (1), 1-11, 2010
Novel theranostic opportunities offered by characterization of altered membrane lipid metabolism in breast cancer progression
M Hilvo, C Denkert, L Lehtinen, B Müller, S Brockmöller, ...
Cancer research 71 (9), 3236-3245, 2011
Association of lipidome remodeling in the adipocyte membrane with acquired obesity in humans
KH Pietiläinen, T Rog, T Seppänen-Laakso, S Virtue, P Gopalacharyulu, ...
PLoS Biol 9 (6), e1000623, 2011
Data analysis tool for comprehensive two-dimensional gas chromatography/time-of-flight mass spectrometry
S Castillo, I Mattila, J Miettinen, M Oresic, T Hyötyläinen
Analytical Chemistry 83 (8), 3058-3067, 2011
Algorithms and tools for the preprocessing of LC–MS metabolomics data
S Castillo, P Gopalacharyulu, L Yetukuri, M Orešič
Chemometrics and Intelligent Laboratory Systems 108 (1), 23-32, 2011
Liquid chromatography-mass spectrometry (LC-MS)-based lipidomics for studies of body fluids and tissues
H Nygren, T Seppänen-Laakso, S Castillo, T Hyötyläinen, M Orešič
Metabolic Profiling, 247-257, 2011
Statistical methods for handling unwanted variation in metabolomics data
AMD Livera, M Sysi-Aho, L Jacob, JA Gagnon-Bartsch, S Castillo, ...
Analytical chemistry 87 (7), 3606-3615, 2015
Prediction of non-alcoholic fatty-liver disease and liver fat content by serum molecular lipids
M Orešič, T Hyötyläinen, A Kotronen, P Gopalacharyulu, H Nygren, ...
Diabetologia 56 (10), 2266-2274, 2013
Bioinformatics and computational methods for lipidomics
PS Niemelä, S Castillo, M Sysi-Aho, M Orešič
Journal of Chromatography B 877 (26), 2855-2862, 2009
Splanchnic balance of free fatty acids, endocannabinoids, and lipids in subjects with nonalcoholic fatty liver disease
J Westerbacka, A Kotronen, BA Fielding, J Wahren, L Hodson, J Perttilä, ...
Gastroenterology 139 (6), 1961-1971. e1, 2010
Inheritance of brewing-relevant phenotypes in constructed Saccharomyces cerevisiae× Saccharomyces eubayanus hybrids
K Krogerus, T Seppänen-Laakso, S Castillo, B Gibson
Microbial cell factories 16 (1), 1-22, 2017
Genome wide analysis of protein production load in Trichoderma reesei
TM Pakula, H Nygren, D Barth, M Heinonen, S Castillo, M Penttilä, ...
Biotechnology for biofuels 9 (1), 1-26, 2016
Whole-genome metabolic model of Trichoderma reesei built by comparative reconstruction
S Castillo, D Barth, M Arvas, TM Pakula, E Pitkänen, P Blomberg, ...
Biotechnology for biofuels 9 (1), 1-20, 2016
Enhanced triacylglycerol production with genetically modified Trichosporon oleaginosus
K Koivuranta, S Castillo, P Jouhten, L Ruohonen, M Penttilä, MG Wiebe
Frontiers in microbiology 9, 1337, 2018
Exploring the potential of Saccharomyces eubayanus as a parent for new interspecies hybrid strains in winemaking
F Magalhães, K Krogerus, S Castillo, A Ortiz-Julien, S Dequin, B Gibson
FEMS yeast research 17 (5), fox049, 2017
Principal metabolic flux mode analysis
S Bhadra, P Blomberg, S Castillo, J Rousu
Bioinformatics 34 (14), 2409-2417, 2018
Machine learning of protein interactions in fungal secretory pathways
J Kludas, M Arvas, S Castillo, T Pakula, M Oja, C Brouard, J Jäntti, ...
PloS one 11 (7), e0159302, 2016
Yeast genome-scale metabolic models for simulating genotype–phenotype relations
S Castillo, KR Patil, P Jouhten
Yeasts in Biotechnology and Human Health, 111-133, 2019
Method for determining liver fat amount and method for diagnosing nafld
M Oresic, T Hyötyläinen, G Peddinti, S Castillo, H Yki-Järvinen
US Patent App. 14/372,895, 2015
Rasvasolujen solukalvo mukautuu ylimääräiseen rasvaan
KH Pietiläinen, T Róg, T Seppänen-Laakso, S Virtue, P Gopalacharyulu, ...
Duodecim 127 (14), 1493, 2011
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