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Ahmadreza (Farzin) Ghaffarizadeh
Ahmadreza (Farzin) Ghaffarizadeh
Uber Technologies
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Year
PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems
A Ghaffarizadeh, R Heiland, SH Friedman, SM Mumenthaler, P Macklin
PLoS computational biology 14 (2), e1005991, 2018
3562018
Thermo‐economic‐environmental multiobjective optimization of a gas turbine power plant with preheater using evolutionary algorithm
H Barzegar Avval, P Ahmadi, AR Ghaffarizadeh, MH Saidi
International Journal of Energy Research 35 (5), 389-403, 2011
2122011
Sensitivity analysis of energy inputs in crop production using artificial neural networks
A Khoshroo, A Emrouznejad, A Ghaffarizadeh, M Kasraei, M Omid
Journal of cleaner production 197, 992-998, 2018
1112018
BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations
A Ghaffarizadeh, SH Friedman, P Macklin
Bioinformatics 32 (8), 1256-1258, 2016
952016
High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow
J Ozik, N Collier, JM Wozniak, C Macal, C Cockrell, SH Friedman, ...
BMC bioinformatics 19, 81-97, 2018
632018
Sorting unsigned permutations by reversals using multi-objective evolutionary algorithms with variable size individuals
A Ghaffarizadeh, K Ahmadi, NS Flann
2011 IEEE Congress of Evolutionary Computation (CEC), 292-295, 2011
432011
Multistable switches and their role in cellular differentiation networks
A Ghaffarizadeh, NS Flann, GJ Podgorski
BMC bioinformatics 15, 1-13, 2014
392014
Progress towards computational 3-d multicellular systems biology
P Macklin, HB Frieboes, JL Sparks, A Ghaffarizadeh, SH Friedman, ...
Systems biology of tumor microenvironment: Quantitative modeling and …, 2016
372016
Investigation on evolutionary algorithms emphasizing mass extinction
A Ghaffarizadeh
Shiraz University, Shiraz, Iran, 2006
272006
Quantifying differences in cell line population dynamics using CellPD
EF Juarez, R Lau, SH Friedman, A Ghaffarizadeh, E Jonckheere, ...
BMC systems biology 10, 1-12, 2016
252016
Optimization of combined cycle power plant using sequential quadratic programming
MR Meigounpoory, P Ahmadi, AR Ghaffarizadeh, S Khanmohammadi
Heat Transfer Summer Conference 48470, 109-114, 2008
232008
Cell death as a trigger for morphogenesis
B Aguilar, A Ghaffarizadeh, CD Johnson, GJ Podgorski, I Shmulevich, ...
PLoS One 13 (3), e0191089, 2018
132018
Improve User Retention with Causal Learning
S Du, J Lee, F Ghaffarizadeh
The 2019 ACM SIGKDD Workshop on Causal Discovery, 34-49, 2019
122019
Quantitative trait loci mapping problem: An Extinction-Based Multi-Objective evolutionary algorithm approach
A Ghaffarizadeh, M Eftekhari, AK Esmailizadeh, NS Flann
Algorithms 6 (3), 546-564, 2013
122013
MultiCellDS: a standard and a community for sharing multicellular data
SH Friedman, ARA Anderson, DM Bortz, AG Fletcher, HB Frieboes, ...
bioRxiv, 090696, 2016
112016
Adding crossover to extinction-based evolutionary algorithms
A Ghaffarizadeh, K Ahmadi, M Eftekhari
2009 Second International Conference on Computer and Electrical Engineering …, 2009
112009
Applying attractor dynamics to infer gene regulatory interactions involved in cellular differentiation
A Ghaffarizadeh, GJ Podgorski, NS Flann
Biosystems 155, 29-41, 2017
102017
MultiCellDS: a community-developed standard for curating microenvironment-dependent multicellular data
SH Friedman, ARA Anderson, DM Bortz, AG Fletcher, HB Frieboes, ...
bioRxiv, 090456, 2016
102016
History based coalition formation in hedonic context using trust
A Ghaffarizadeh, VH Allan
arXiv preprint arXiv:1308.3324, 2013
102013
Agent-based simulation of large tumors in 3-D microenvironments
A Ghaffarizadeh, SH Friedman, P Macklin
bioRxiv, 035733, 2015
92015
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Articles 1–20