Roman Volodymyr Briskine
Roman Volodymyr Briskine
Science IT Consultant, Universität Zürich
Verified email at uzh.ch
Title
Cited by
Cited by
Year
Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula
A Branca, TD Paape, P Zhou, R Briskine, AD Farmer, J Mudge, AK Bharti, ...
Proceedings of the National Academy of Sciences 108 (42), E864-E870, 2011
2062011
Epigenetic and genetic influences on DNA methylation variation in maize populations
SR Eichten, R Briskine, J Song, Q Li, R Swanson-Wagner, PJ Hermanson, ...
The Plant Cell 25 (8), 2783-2797, 2013
1722013
Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays
RS Sekhon, R Briskine, CN Hirsch, CL Myers, NM Springer, CR Buell, ...
PloS one 8 (4), e61005, 2013
1402013
Genomic signature of adaptation to climate in Medicago truncatula
JB Yoder, J Stanton-Geddes, P Zhou, R Briskine, ND Young, P Tiffin
Genetics 196 (4), 1263-1275, 2014
1332014
Candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome, sequence-based association genetics in Medicago truncatula
J Stanton-Geddes, T Paape, B Epstein, R Briskine, J Yoder, J Mudge, ...
PLoS ONE 8 (5), e65688, 2013
1242013
Reshaping of the maize transcriptome by domestication
R Swanson-Wagner, R Briskine, R Schaefer, MB Hufford, J Ross-Ibarra, ...
Proceedings of the National Academy of Sciences 109 (29), 11878-11883, 2012
1172012
Genomic distribution of maize facultative heterochromatin marked by trimethylation of H3K27
I Makarevitch, SR Eichten, R Briskine, AJ Waters, ON Danilevskaya, ...
The Plant Cell 25 (3), 780-793, 2013
752013
Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae
B Epstein, A Branca, J Mudge, AK Bharti, R Briskine, AD Farmer, ...
PLoS Genet 8 (8), e1002868-e1002868, 2012
732012
Fine-scale population recombination rates, hotspots, and correlates of recombination in the Medicago truncatula genome
T Paape, P Zhou, A Branca, R Briskine, N Young, P Tiffin
Genome biology and evolution 4 (5), 726-737, 2012
642012
High‐density genome‐wide association mapping implicates an F‐box encoding gene in Medicago truncatula resistance to Aphanomyces euteiches
M Bonhomme, O André, Y Badis, J Ronfort, C Burgarella, N Chantret, ...
New Phytologist 201 (4), 1328-1342, 2014
572014
Phylogenetic signal variation in the genomes of Medicago (Fabaceae)
JB Yoder, R Briskine, J Mudge, A Farmer, T Paape, K Steele, GD Weiblen, ...
Systematic biology 62 (3), 424-438, 2013
542013
The Cardamine hirsuta genome offers insight into the evolution of morphological diversity
X Gan, A Hay, M Kwantes, G Haberer, A Hallab, RD Ioio, H Hofhuis, ...
Nature Plants 2, 16167, 2016
492016
Selection, genome‐wide fitness effects and evolutionary rates in the model legume Medicago truncatula
T Paape, T Bataillon, P Zhou, T JY Kono, R Briskine, ND Young, P Tiffin
Molecular ecology 22 (13), 3525-3538, 2013
462013
Genome assembly and annotation of Arabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology
RV Briskine, T Paape, R Shimizu‐Inatsugi, T Nishiyama, S Akama, J Sese, ...
Molecular Ecology Resources, 2016
442016
Estimating heritability using genomic data
J Stanton‐Geddes, JB Yoder, R Briskine, ND Young, P Tiffin
Methods in Ecology and Evolution 4 (12), 1151-1158, 2013
352013
Discovering functional modules across diverse maize transcriptomes using COB, the co-expression browser
RJ Schaefer, R Briskine, NM Springer, CL Myers
PLoS ONE 9 (6), e99193, 2014
272014
Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias
L Li, R Briskine, R Schaefer, PS Schnable, CL Myers, LE Flagel, ...
BMC Genomics 17 (1), 875, 2016
182016
Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica
T Paape, RV Briskine, G Halstead-Nussloch, HEL Lischer, ...
Nature communications 9 (1), 3909, 2018
162018
Positional bias in variant calls against draft reference assemblies
RV Briskine, KK Shimizu
BMC Genomics 18 (1), 263, 2017
72017
Patterns of polymorphism, selection and linkage disequilibrium in the subgenomes of the allopolyploid Arabidopsis kamchatica
T Paape, RV Briskine, HEL Lischer, G Halstead-Nussloch, ...
bioRxiv, 248195, 2018
22018
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