Sumit Mukherjee
Sumit Mukherjee
Cancer Data Science Lab (CDSL), NCI/NIH
Verified email at - Homepage
Cited by
Cited by
Immunoinformatics and structural analysis for identification of immunodominant epitopes in SARS-CoV-2 as potential vaccine targets
S Mukherjee, D Tworowski, R Detroja, SB Mukherjee, ...
Vaccines 8 (2), 290, 2020
Riboswitch Scanner: an efficient pHMM-based web-server to detect riboswitches in genomic sequences
S Mukherjee, S Sengupta
Bioinformatics 32 (5), 776–778, 2015
COVID19 Drug Repository: text-mining the literature in search of putative COVID19 therapeutics
D Tworowski, A Gorohovski, S Mukherjee, G Carmi, E Levy, R Detroja, ...
Nucleic acids research 49 (D1), D1113-D1121, 2021
mRNA-lncRNA Co-Expression Network Analysis Reveals the Role of lncRNAs in Immune Dysfunction during Severe SARS-CoV-2 Infection
S Mukherjee, B Banerjee, D Karasik, M Frenkel-Morgenstern
Viruses 13 (3), 402, 2021
Clinical and molecular characterization of a rare case of BNT162b2 mRNA COVID-19 vaccine-associated myositis
E Magen, S Mukherjee, M Bhattacharya, R Detroja, E Merzon, I Blum, ...
Vaccines 10 (7), 1135, 2022
Phylogenomic and comparative analysis of the distribution and regulatory patterns of TPP riboswitches in fungi
S Mukherjee, MD Retwitzer, D Barash, S Sengupta
Scientific reports 8 (1), 5563, 2018
RiboD: a comprehensive database for prokaryotic riboswitches
S Mukherjee, S Das Mandal, N Gupta, M Drory-Retwitzer, D Barash, ...
Bioinformatics 35 (18), 3541-3543, 2019
Computational analysis of sense-antisense chimeric transcripts reveals their potential regulatory features and the landscape of expression in human cells
S Mukherjee, R Detroja, D Balamurali, E Matveishina, YA Medvedeva, ...
NAR Genomics and Bioinformatics 3 (3), lqab074, 2021
Elucidating evolutionary features and functional implications of orphan genes in Leishmania major
S Mukherjee, A Panda, TC Ghosh
Infection, Genetics and Evolution 32, 330-337, 2015
Comparative genomics and phylogenomic analyses of lysine riboswitch distributions in bacteria
S Mukherjee, D Barash, S Sengupta
PLoS ONE 12 (9), e0184314, 2017
Non‐optimal codon usage preferences of coronaviruses determine their promiscuity for infecting multiple hosts
G Carmi, A Gorohovski, S Mukherjee, M Frenkel‐Morgenstern
The FEBS journal 288 (17), 5201-5223, 2021
Emerging role of chimeric RNAs in cell plasticity and adaptive evolution of cancer cells
S Mukherjee, HH Heng, M Frenkel-Morgenstern
Cancers 13 (17), 4328, 2021
Evolutionary impact of chimeric RNAs on generating phenotypic plasticity in human cells
S Mukherjee, M Frenkel-Morgenstern
Trends in Genetics 38 (1), 4-7, 2021
Identification of potential new vaccine candidates in Salmonella typhi using reverse vaccinology and subtractive genomics-based approach
S Mukherjee, K Gangopadhay, SB Mukherjee
bioRxiv, 521518, 2019
Seasonal UV exposure and vitamin D: Association with the dynamics of COVID-19 transmission in Europe
SB Mukherjee, A Gorohovski, E Merzon, E Levy, S Mukherjee, ...
FEBS open bio, 2021
Insight into the distinctive paradigm of Human Cytomegalovirus associated intrahepatic and extrahepatic cholestasis in neonates
A Chatterjee, S Mukherjee, B Basu, D Roy, R Basu, H Ghosh, L Mishra, ...
Scientific reports 10 (1), 15861, 2020
Fusion proteins mediate alternation of protein interaction networks in cancers
SB Mukherjee, S Mukherjee, M Frenkel-Morgenstern
Advances in Protein Chemistry and Structural Biology (Academic Press - Elsevier), 2022
A cross-sectional study exploring disease characteristics and phylogenetic nature of human cytomegalovirus among infected neonates with congenital nephrotic syndrome
A Chatterjee, S Mukherjee, B Basu, D Roy, R Basu, H Ghosh, ...
Pediatric Nephrology 35, 1257-1266, 2020
Identifying Hub Genes Associated with Neoadjuvant Chemotherapy Resistance in Breast Cancer and Potential Drug Repurposing for the Development of Precision Medicine
T Saha Detroja, R Detroja, S Mukherjee, AO Samson
International Journal of Molecular Sciences 23 (20), 12628, 2022
Incipient sympatric speciation and evolution of soil bacteria revealed by metagenomic and structured non-coding RNAs analysis
S Mukherjee, Z Kuang, S Ghosh, R Detroja, G Carmi, S Tripathy, ...
Biology 11 (8), 1110, 2022
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Articles 1–20