| Physics-based protein-structure prediction using a hierarchical protocol based on the UNRES force field: assessment in two blind tests S Ołdziej, C Czaplewski, A Liwo, M Chinchio, M Nanias, JA Vila, M Khalili, ... Proceedings of the National Academy of Sciences 102 (21), 7547-7552, 2005 | 182 | 2005 |
| Molecular dynamics with the united-residue model of polypeptide chains. II. Langevin and Berendsen-bath dynamics and tests on model α-helical systems M Khalili, A Liwo, A Jagielska, HA Scheraga The Journal of Physical Chemistry B 109 (28), 13798-13810, 2005 | 168 | 2005 |
| Mechanical environment modulates biological properties of oligodendrocyte progenitor cells A Jagielska, AL Norman, G Whyte, KJV Vliet, J Guck, RJM Franklin Stem cells and development 21 (16), 2905-2914, 2012 | 151 | 2012 |
| A new force field (ECEPP-05) for peptides, proteins, and organic molecules YA Arnautova, A Jagielska, HA Scheraga The Journal of Physical Chemistry B 110 (10), 5025-5044, 2006 | 141 | 2006 |
| Engineered 3D-printed artificial axons D Espinosa-Hoyos, A Jagielska, KA Homan, H Du, T Busbee, ... Scientific reports 8 (1), 478, 2018 | 89 | 2018 |
| Protein model refinement using an optimized physics-based all-atom force field A Jagielska, L Wroblewska, J Skolnick Proceedings of the National Academy of Sciences 105 (24), 8268-8273, 2008 | 80 | 2008 |
| Mechanical strain promotes oligodendrocyte differentiation by global changes of gene expression A Jagielska, AL Lowe, E Makhija, L Wroblewska, J Guck, RJM Franklin, ... Frontiers in cellular neuroscience 11, 93, 2017 | 75 | 2017 |
| Stiffness of targeted layer-by-layer nanoparticles impacts elimination half-life, tumor accumulation, and tumor penetration SM Kong, DF Costa, A Jagielska, KJ Van Vliet, PT Hammond Proceedings of the National Academy of Sciences 118 (42), e2104826118, 2021 | 57 | 2021 |
| Disulfide bonding arrangements in active forms of the somatomedin B domain of human vitronectin Y Kamikubo, R De Guzman, G Kroon, S Curriden, JG Neels, MJ Churchill, ... Biochemistry 43 (21), 6519-6534, 2004 | 54 | 2004 |
| Characterizing multiscale mechanical properties of brain tissue using atomic force microscopy, impact indentation, and rheometry EP Canovic, B Qing, AS Mijailovic, A Jagielska, MJ Whitfield, E Kelly, ... Journal of Visualized Experiments: JoVE, 54201, 2016 | 48 | 2016 |
| Development of a physics-based force field for the scoring and refinement of protein models L Wroblewska, A Jagielska, J Skolnick Biophysical journal 94 (8), 3227-3240, 2008 | 46 | 2008 |
| Influence of temperature, friction, and random forces on folding of the B‐domain of staphylococcal protein A: All‐atom molecular dynamics in implicit solvent A Jagielska, HA Scheraga Journal of Computational Chemistry 28 (6), 1068-1082, 2007 | 44 | 2007 |
| The protein folding problem: Global optimization of force fields HA Scheraga, A Liwo, S Ołdziej, C Czaplewski, J Pillardy, DR Ripoll, ... Front Biosci 9, 3296-3323, 2004 | 40 | 2004 |
| A theoretical and experimental 14N NMR study of association of pyridine E Megiel, T Kasprzycka-Guttman, A Jagielska, L Wroblewska Journal of Molecular Structure 569 (1-3), 111-119, 2001 | 35 | 2001 |
| Neutral Ni (II) and Cu (II) complexes of tetraazatetraenemacrocyles W Grochala, A Jagielska, K Woźniak, A Wiȩckowska, R Bilewicz, ... Journal of Physical Organic Chemistry 14 (2), 63-73, 2001 | 29 | 2001 |
| Ab initio theoretical study of interactions in borazane molecule A Jagielska, R Moszyński, L Piela The Journal of chemical physics 110 (2), 947-954, 1999 | 29 | 1999 |
| Extracellular acidic pH inhibits oligodendrocyte precursor viability, migration, and differentiation A Jagielska, KD Wilhite, KJ Van Vliet PLoS One 8 (9), e76048, 2013 | 28 | 2013 |
| Derivation of a new force field for crystal-structure prediction using global optimization: nonbonded potential parameters for hydrocarbons and alcohols YA Arnautova, A Jagielska, J Pillardy, HA Scheraga The Journal of Physical Chemistry B 107 (29), 7143-7154, 2003 | 25 | 2003 |
| Mechanical strain alters cellular and nuclear dynamics at early stages of oligodendrocyte differentiation E Makhija, A Jagielska, L Zhu, AC Bost, W Ong, SY Chew, ... Frontiers in Cellular Neuroscience 12, 59, 2018 | 24 | 2018 |
| Derivation of a new force field for crystal-structure prediction using global optimization: nonbonded potential parameters for amines, imidazoles, amides, and carboxylic acids A Jagielska, YA Arnautova, HA Scheraga The Journal of Physical Chemistry B 108 (32), 12181-12196, 2004 | 23 | 2004 |
