| Ultrastructural details of mammalian chromosome architecture N Krietenstein, S Abraham, SV Venev, N Abdennur, J Gibcus, THS Hsieh, ... Molecular cell 78 (3), 554-565. e7, 2020 | 401 | 2020 |
| Systematic evaluation of chromosome conformation capture assays B Akgol Oksuz, L Yang, S Abraham, SV Venev, N Krietenstein, KM Parsi, ... Nature methods 18 (9), 1046-1055, 2021 | 121 | 2021 |
| Identifying orthogonal solvents for solution processed organic transistors AM Gaikwad, Y Khan, AE Ostfeld, S Pandya, S Abraham, AC Arias Organic Electronics 30, 18-29, 2016 | 117 | 2016 |
| Cooltools: enabling high-resolution Hi-C analysis in Python Open2C, N Abdennur, S Abraham, G Fudenberg, IM Flyamer, ... BioRxiv, 2022.10. 31.514564, 2022 | 31 | 2022 |
| open2c/cooltools: v0. 4.1 S Venev, N Abdennur, A Goloborodko, I Flyamer, G Fudenberg, J Nuebler, ... Zenodo10 5281, 2021 | 14 | 2021 |
| Cooltools: enabling high-resolution Hi-C analysis in Python. preprint NA Open2C, S Abraham, G Fudenberg, IM Flyamer, AA Galitsyna, ... Bioinformatics, November, 2022 | 13 | 2022 |
| mirnylab/cooltools: v0. 3.2 S Venev, N Abdennur, A Goloborodko, I Flyamer, G Fudenberg, J Nuebler, ... Zenodo https://doi. org/10.5281/zenodo 3787004, 2020 | 8 | 2020 |
| Open2c/cooltools: v0. 4.1 Zenodo. 2021 S Venev, N Abdennur, A Goloborodko, I Flyamer, G Fudenberg, J Nuebler, ... | 3 | |
| A method to recognize universal patterns in genome structure using Hi-C N Chowdhury, S Abraham MIT PRIMES Research Papers, 2019 | 2 | 2019 |
| Rules of engagement for condensins and cohesins guide mitotic chromosome formation K Samejima, JH Gibcus, S Abraham, F Cisneros-Soberanis, I Samejima, ... bioRxiv, 2024.04. 18.590027, 2024 | | 2024 |
| Unique territorial and sub-chromosomal organization revealed in the holocentric moth Bombyx mori J Gil Jr, LF Rosin, E Navarrete, N Chowdhury, S Abraham, G Cornilleau, ... bioRxiv, 2023.09. 14.557757, 2023 | | 2023 |
| Patterns and processes driving chromosome organization S Abraham Massachusetts Institute of Technology, 2022 | | 2022 |
