Thomas E. Kuhlman
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Transcriptional regulation by the numbers: applications
L Bintu, NE Buchler, HG Garcia, U Gerland, T Hwa, J Kondev, T Kuhlman, ...
Current opinion in genetics & development 15 (2), 125-135, 2005
Quantitative characteristics of gene regulation by small RNA
E Levine, Z Zhang, T Kuhlman, T Hwa
PLoS biology 5 (9), e229, 2007
Combinatorial transcriptional control of the lactose operon of Escherichia coli
T Kuhlman, Z Zhang, MH Saier Jr, T Hwa
Proceedings of the National Academy of Sciences 104 (14), 6043-6048, 2007
Site-specific chromosomal integration of large synthetic constructs
TE Kuhlman, EC Cox
Nucleic acids research 38 (6), e92-e92, 2010
Gene location and DNA density determine transcription factor distributions in Escherichia coli
TE Kuhlman, EC Cox
Molecular systems biology 8 (1), 610, 2012
Effect of Genomic Integration Location on Heterologous Protein Expression and Metabolic Engineering in E. coli
JA Englaender, JA Jones, BF Cress, TE Kuhlman, RJ Linhardt, ...
ACS Synthetic Biology 6 (4), 710-720, 2017
Tandem spinach array for mRNA imaging in living bacterial cells
J Zhang, J Fei, BJ Leslie, KY Han, TE Kuhlman, T Ha
Scientific reports 5 (1), 17295, 2015
Environment determines evolutionary trajectory in a constrained phenotypic space
DT Fraebel, H Mickalide, D Schnitkey, J Merritt, TE Kuhlman, S Kuehn
Elife 6, e24669, 2017
Transcription by the numbers redux: experiments and calculations that surprise
HG Garcia, A Sanchez, T Kuhlman, J Kondev, R Phillips
Trends in cell biology 20 (12), 723-733, 2010
An integrated system for precise genome modification in Escherichia coli
H Tas, CT Nguyen, R Patel, NH Kim, TE Kuhlman
PloS one 10 (9), e0136963, 2015
Automated single cell microbioreactor for monitoring intracellular dynamics and cell growth in free solution
EM Johnson-Chavarria, U Agrawal, M Tanyeri, TE Kuhlman, ...
Lab on a Chip 14 (15), 2688-2697, 2014
Real Time Transposable Element Activity in Individual Live Cells
NH Kim, G Lee, NA Sherer, KM Martini, N Goldenfeld, TE Kuhlman
Biophysical Journal 110 (3), 478a-479a, 2016
A place for everything: Chromosomal integration of large constructs
TE Kuhlman, EC Cox
Bioengineered bugs 1 (4), 298-301, 2010
Ribosome biogenesis in replicating cells: integration of experiment and theory
TM Earnest, JA Cole, JR Peterson, MJ Hallock, TE Kuhlman, ...
Biopolymers 105 (10), 735-751, 2016
DNA-binding-protein inhomogeneity in E. coli modeled as biphasic facilitated diffusion
TE Kuhlman, EC Cox
Physical Review E 88 (2), 022701, 2013
Testing the retroelement invasion hypothesis for the emergence of the ancestral eukaryotic cell
G Lee, NA Sherer, NH Kim, E Rajic, D Kaur, N Urriola, KM Martini, C Xue, ...
Proceedings of the National Academy of Sciences 115 (49), 12465-12470, 2018
Targeted insertion of large genetic payloads using cas directed LINE-1 reverse transcriptase
F Manoj, LW Tai, KSM Wang, TE Kuhlman
Scientific Reports 11 (1), 23625, 2021
Escherichia coli with a Tunable Point Mutation Rate for Evolution Experiments
NA Sherer, TE Kuhlman
G3: Genes, Genomes, Genetics 10 (8), 2671-2681, 2020
IS200/IS605 family-associated TnpB increases transposon activity and retention
D Kaur, TE Kuhlman
bioRxiv, 2022.10. 12.511977, 2022
On noise and silence in small RNA regulation
E Levine, M Huang, Y Huang, T Kuhlman, H Shi, Z Zhang, T Hwa
URL matisse. ucsd. edu/, hwa/pub/sRNA-noise. pdf. Preprint, 2008
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