Karthik Shekhar
Title
Cited by
Cited by
Year
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
EZ Macosko, A Basu, R Satija, J Nemesh, K Shekhar, M Goldman, I Tirosh, ...
Cell 161 (5), 1202-1214, 2015
32082015
Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors
AC Villani, R Satija, G Reynolds, S Sarkizova, K Shekhar, J Fletcher, ...
Science 356 (6335), 2017
8982017
Therapeutic efficacy of potent neutralizing HIV-1-specific monoclonal antibodies in SHIV-infected rhesus monkeys
DH Barouch, JB Whitney, B Moldt, F Klein, TY Oliveira, J Liu, ...
Nature 503 (7475), 224-228, 2013
6132013
Comprehensive classification of retinal bipolar neurons by single-cell transcriptomics
K Shekhar, SW Lapan, IE Whitney, NM Tran, EZ Macosko, M Kowalczyk, ...
Cell 166 (5), 1308-1323. e30, 2016
5842016
A single-cell survey of the small intestinal epithelium
AL Haber, M Biton, N Rogel, RH Herbst, K Shekhar, C Smillie, G Burgin, ...
Nature 551 (7680), 333-339, 2017
4562017
Massively parallel single-nucleus RNA-seq with DroNc-seq
N Habib, I Avraham-Davidi, A Basu, T Burks, K Shekhar, M Hofree, ...
Nature methods 14 (10), 955-958, 2017
3542017
Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis
JA Farrell, Y Wang, SJ Riesenfeld, K Shekhar, A Regev, AF Schier
Science 360 (6392), 2018
2532018
Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region
JR Moffitt, D Bambah-Mukku, SW Eichhorn, E Vaughn, K Shekhar, ...
Science 362 (6416), 2018
1992018
Automatic classification of cellular expression by nonlinear stochastic embedding (ACCENSE)
K Shekhar, P Brodin, MM Davis, AK Chakraborty
Proceedings of the National Academy of Sciences 111 (1), 202-207, 2014
1852014
Coordinate linkage of HIV evolution reveals regions of immunological vulnerability
V Dahirel, K Shekhar, F Pereyra, T Miura, M Artyomov, S Talsania, ...
Proceedings of the National Academy of Sciences 108 (28), 11530-11535, 2011
1822011
Coordinate linkage of HIV evolution reveals regions of immunological vulnerability
V Dahirel, K Shekhar, F Pereyra, T Miura, M Artyomov, S Talsania, ...
Proceedings of the National Academy of Sciences 108 (28), 11530-11535, 2011
1822011
Magnitude and kinetics of CD8+ T cell activation during hyperacute HIV infection impact viral set point
ZM Ndhlovu, P Kamya, N Mewalal, HN Kløverpris, T Nkosi, K Pretorius, ...
Immunity 43 (3), 591-604, 2015
1522015
T helper cell cytokines modulate intestinal stem cell renewal and differentiation
M Biton, AL Haber, N Rogel, G Burgin, S Beyaz, A Schnell, O Ashenberg, ...
Cell 175 (5), 1307-1320. e22, 2018
1132018
Molecular classification and comparative taxonomics of foveal and peripheral cells in primate retina
YR Peng, K Shekhar, W Yan, D Herrmann, A Sappington, GS Bryman, ...
Cell 176 (5), 1222-1237. e22, 2019
1102019
Comprehensive identification and spatial mapping of habenular neuronal types using single-cell RNA-seq
S Pandey, K Shekhar, A Regev, AF Schier
Current Biology 28 (7), 1052-1065. e7, 2018
732018
Hydrophobic CDR3 residues promote the development of self-reactive T cells
BD Stadinski, K Shekhar, I Gómez-Touriño, J Jung, K Sasaki, AK Sewell, ...
Nature immunology 17 (8), 946-955, 2016
642016
Spin models inferred from patient-derived viral sequence data faithfully describe HIV fitness landscapes
K Shekhar, CF Ruberman, AL Ferguson, JP Barton, M Kardar, ...
Physical review E 88 (6), 062705, 2013
642013
Continuous immunotypes describe human immune variation and predict diverse responses
KJ Kaczorowski, K Shekhar, D Nkulikiyimfura, CL Dekker, H Maecker, ...
Proceedings of the National Academy of Sciences 114 (30), E6097-E6106, 2017
582017
A carbon powder-nanotube composite cathode for non-aqueous lithium-air batteries
P Tan, W Shyy, ZH Wei, L An, TS Zhao
Electrochimica Acta 147, 1-8, 2014
372014
Single-cell profiles of retinal ganglion cells differing in resilience to injury reveal neuroprotective genes
NM Tran, K Shekhar, IE Whitney, A Jacobi, I Benhar, G Hong, W Yan, ...
Neuron 104 (6), 1039-1055. e12, 2019
362019
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Articles 1–20