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Rajesh Detroja
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Immunoinformatics and structural analysis for identification of immunodominant epitopes in SARS-CoV-2 as potential vaccine targets
S Mukherjee, D Tworowski, R Detroja, SB Mukherjee, ...
Vaccines 8 (2), 290, 2020
672020
COVID19 Drug Repository: text-mining the literature in search of putative COVID19 therapeutics
D Tworowski, A Gorohovski, S Mukherjee, G Carmi, E Levy, R Detroja, ...
Nucleic acids research 49 (D1), D1113-D1121, 2021
372021
Clinical and molecular characterization of a rare case of BNT162b2 mRNA COVID-19 vaccine-associated myositis
E Magen, S Mukherjee, M Bhattacharya, R Detroja, E Merzon, I Blum, ...
Vaccines 10 (7), 1135, 2022
302022
ChiTaRS 5.0: the comprehensive database of chimeric transcripts matched with druggable fusions and 3D chromatin maps
D Balamurali, A Gorohovski, R Detroja, V Palande, D Raviv-Shay, ...
Nucleic acids research 48 (D1), D825-D834, 2020
292020
Altered expression and localization of tumor suppressive E3 ubiquitin ligase SMURF2 in human prostate and breast cancer
A Emanuelli, D Manikoth Ayyathan, P Koganti, PA Shah, L Apel-Sarid, ...
Cancers 11 (4), 556, 2019
222019
Detection of gene mutations and gene–gene fusions in circulating cell‐free DNA of glioblastoma patients: an avenue for clinically relevant diagnostic analysis
V Palande, T Siegal, R Detroja, A Gorohovski, R Glass, C Flueh, ...
Molecular Oncology 16 (10), 2098-2114, 2022
182022
Computational analysis of sense-antisense chimeric transcripts reveals their potential regulatory features and the landscape of expression in human cells
S Mukherjee, R Detroja, D Balamurali, E Matveishina, YA Medvedeva, ...
NAR Genomics and Bioinformatics 3 (3), lqab074, 2021
162021
The chromatin remodeler Chd1 regulates cohesin in budding yeast and humans
A Boginya, R Detroja, A Matityahu, M Frenkel-Morgenstern, I Onn
Scientific Reports 9 (1), 8929, 2019
162019
Identifying hub genes associated with neoadjuvant chemotherapy resistance in breast cancer and potential drug repurposing for the development of precision medicine
T Saha Detroja, R Detroja, S Mukherjee, AO Samson
International Journal of Molecular Sciences 23 (20), 12628, 2022
42022
The landscape of novel expressed chimeric RNAs in rheumatoid arthritis
R Detroja, S Mukherjee, M Frenkel-Morgenstern
Cells 11 (7), 1092, 2022
42022
ChiTaH: a fast and accurate tool for identifying known human chimeric sequences from high-throughput sequencing data
R Detroja, A Gorohovski, O Giwa, G Baum, M Frenkel-Morgenstern
NAR genomics and bioinformatics 3 (4), lqab112, 2021
42021
tRNA methylation resolves codon usage bias at the limit of cell viability
I Masuda, Y Yamaki, R Detroja, S Tagore, H Moore, S Maharjan, ...
Cell reports 41 (4), 2022
32022
Incipient sympatric speciation and evolution of soil bacteria revealed by metagenomic and structured non-coding RNAs analysis
S Mukherjee, Z Kuang, S Ghosh, R Detroja, G Carmi, S Tripathy, ...
Biology 11 (8), 1110, 2022
32022
The landscape of differential splicing and transcript alternations in severe COVID‐19 infection
SB Mukherjee, S Mukherjee, R Detroja, M Frenkel‐Morgenstern
The FEBS Journal 290 (12), 3128-3144, 2023
22023
A liquid biopsy platform for detecting gene-gene fusions as glioma diagnostic biomarkers and drug targets
V Palande, R Detroja, A Gorohovski, R Glass, C Flueh, M Kurtz, S Perez, ...
bioRxiv, 2020.02. 25.963975, 2020
12020
Draft genome sequence of the yeast Saccharomyces cerevisiae GUJ105 from Gujarat, India
C Badapanda, R Detroja, A Rathore
Genome Announcements 4 (6), 10.1128/genomea. 01315-16, 2016
12016
Methods and biomarkers for diagnostics, disease monitoring, personalized drug discovery and targeted therapy of malignant and neurodegenerative disease conditions
M Frenkel-Morgenstern, R DETROJA, V PALANDE
US Patent App. 17/777,467, 2023
2023
Methods and biomarkers for diagnostics, disease monitoring, personalized drug discovery and targeted therapy of autoimmune disease conditions
M Frenkel-Morgenstern, R Detroja, V Palande, DR SHAY
US Patent App. 17/777,497, 2023
2023
The Landscape of Expressed Chimeric Transcripts in the Blood of Severe COVID-19 Infected Patients
SB Mukherjee, R Detroja, S Mukherjee, M Frenkel-Morgenstern
Viruses 15 (2), 433, 2023
2023
Circulating cell-free DNA in oral squamous cell carcinoma patients allows for non-invasive prognosis and identification of structural variants, novel chimeras and oncoviruses
MR Bhattacharya, D Yaniv, S Pachakar, DP D'Souza, R Detroja, G Baum, ...
medRxiv, 2023.11. 29.23299177, 2023
2023
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