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Chenchen Zhu
Chenchen Zhu
Stanford University
Verified email at embl.de
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Cited by
Year
Genotype-environment interactions reveal causal pathways that mediate genetic effects on phenotype
J Gagneur, O Stegle, C Zhu, P Jakob, MM Tekkedil, RS Aiyar, AK Schuon, ...
PLoS genetics 9 (9), e1003803, 2013
922013
Modulation of mRNA and lncRNA expression dynamics by the Set2–Rpd3S pathway
JH Kim, BB Lee, YM Oh, C Zhu, LM Steinmetz, Y Lee, WK Kim, SB Lee, ...
Nature communications 7 (1), 13534, 2016
882016
Roadblock termination by reb1p restricts cryptic and readthrough transcription
J Colin, T Candelli, O Porrua, J Boulay, C Zhu, F Lacroute, LM Steinmetz, ...
Molecular cell 56 (5), 667-680, 2014
772014
Organization of the human intestine at single-cell resolution
JW Hickey, WR Becker, SA Nevins, A Horning, AE Perez, C Zhu, B Zhu, ...
Nature 619 (7970), 572-584, 2023
542023
iPSC modeling of RBM20-deficient DCM identifies upregulation of RBM20 as a therapeutic strategy
F Briganti, H Sun, W Wei, J Wu, C Zhu, M Liss, I Karakikes, S Rego, ...
Cell reports 32 (10), 2020
472020
Chromatin dynamics and the RNA exosome function in concert to regulate transcriptional homeostasis
M Rege, V Subramanian, C Zhu, THS Hsieh, A Weiner, N Friedman, ...
Cell reports 13 (8), 1610-1622, 2015
452015
Yeast growth plasticity is regulated by environment-specific multi-QTL interactions
A Bhatia, A Yadav, C Zhu, J Gagneur, A Radhakrishnan, LM Steinmetz, ...
G3: Genes, Genomes, Genetics 4 (5), 769-777, 2014
372014
Loss of the yeast SR protein Npl3 alters gene expression due to transcription readthrough
RK Holmes, AC Tuck, C Zhu, HR Dunn-Davies, G Kudla, ...
PLoS genetics 11 (12), e1005735, 2015
342015
NAD (P) HX repair deficiency causes central metabolic perturbations in yeast and human cells
J Becker‐Kettern, N Paczia, JF Conrotte, C Zhu, O Fiehn, PP Jung, ...
The FEBS journal 285 (18), 3376-3401, 2018
322018
Single-molecule, full-length transcript isoform sequencing reveals disease-associated RNA isoforms in cardiomyocytes
C Zhu, J Wu, H Sun, F Briganti, B Meder, W Wei, LM Steinmetz
Nature Communications 12 (1), 4203, 2021
272021
Transcription factor GATA4 regulates cell type–specific splicing through direct interaction with RNA in human induced pluripotent stem cell–derived cardiac progenitors
L Zhu, K Choudhary, B Gonzalez-Teran, YS Ang, R Thomas, NR Stone, ...
Circulation 146 (10), 770-787, 2022
112022
Evaluating the characteristics of reporter ion signal acquired in the Orbitrap analyzer for isobaric mass tag proteome quantification experiments
CS Hughes, C Zhu, V Spicer, OV Krokhin, GB Morin
Journal of Proteome Research 16 (5), 1831-1838, 2017
72017
Modulation of mRNA and lncRNA expression dynamics by the Set2-Rpd3S pathway. Nat Commun 7: 13534
JH Kim, BB Lee, YM Oh, C Zhu, LM Steinmetz, Y Lee, WK Kim, SB Lee, ...
52016
Use of bacteria for the sensing and killing of cancer cells
R Eils, P Hundeshagen, Y Reis, D Richter, J Keienburg, M Reichenzeller, ...
US Patent App. 13/125,945, 2011
42011
Genotype complements the phenotype: identification of the pathogenicity of an LMNA splice variant by nanopore long-read sequencing in a large DCM family
F Sedaghat-Hamedani, S Rebs, E Kayvanpour, C Zhu, A Amr, M Müller, ...
International Journal of Molecular Sciences 23 (20), 12230, 2022
32022
Identification and quantification of small exon-containing isoforms in long-read RNA sequencing data
Z Liu, C Zhu, LM Steinmetz, W Wei
Nucleic Acids Research 51 (20), e104-e104, 2023
22023
Tyrosine kinase inhibitors induce mitochondrial dysfunction during cardiomyocyte differentiation through alteration of GATA4-mediated networks
Q Liu, H Wu, QJ Luo, C Jiang, Z Duren, K Van Bortle, M Zhao, B Zhao, ...
bioRxiv, 2020.05. 04.077024, 2020
12020
CDKN1A-RAB44 transcript fusion and activation in cancers
H Sun, M Nguyen, W Mueller, Z Cheng, H Zeng, C Zhu, J Wu, K Roy, ...
bioRxiv, 111856, 2017
12017
Erratum: Modulation of mRNA and lncRNA expression dynamics by the Set2–Rpd3S pathway
JH Kim, BB Lee, YM Oh, C Zhu, LM Steinmetz, Y Lee, WK Kim, SB Lee, ...
Nature Communications 8, 2017
12017
High throughput approaches to study molecular pathways from genotype to phenotype
C Zhu
ETH Zurich, 2016
12016
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Articles 1–20