| An atlas of active enhancers across human cell types and tissues R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ... Nature 507 (7493), 455-461, 2014 | 2603 | 2014 |
| A promoter-level mammalian expression atlas Nature 507 (7493), 462-470, 2014 | 1692 | 2014 |
| Gateways to the FANTOM5 promoter level mammalian expression atlas M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ... Genome biology 16, 1-14, 2015 | 833 | 2015 |
| Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ... Science 347 (6225), 1010-1014, 2015 | 597 | 2015 |
| Site-specific DICER and DROSHA RNA products control the DNA-damage response S Francia, F Michelini, A Saxena, D Tang, M De Hoon, V Anelli, M Mione, ... Nature 488 (7410), 231-235, 2012 | 575 | 2012 |
| Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance A Fort, K Hashimoto, D Yamada, M Salimullah, CA Keya, A Saxena, ... Nature genetics 46 (6), 558-566, 2014 | 312 | 2014 |
| A predictive computational framework for direct reprogramming between human cell types OJL Rackham, J Firas, H Fang, ME Oates, ML Holmes, AS Knaupp, ... Nature genetics 48 (3), 331-335, 2016 | 297 | 2016 |
| Effects of cytosine methylation on transcription factor binding sites YA Medvedeva, AM Khamis, IV Kulakovskiy, W Ba-Alawi, MSI Bhuyan, ... BMC genomics 15, 1-12, 2014 | 288 | 2014 |
| EpiFactors: a comprehensive database of human epigenetic factors and complexes YA Medvedeva, A Lennartsson, R Ehsani, IV Kulakovskiy, IE Vorontsov, ... Database 2015, bav067, 2015 | 285 | 2015 |
| Chromatin associated RNAi components control transcriptional regulation in Drosophila OV Cernilogar F, Onoratti MC, O’ Kothe G, Burroughs A Nature 480 (7377), 391-395, 2011 | 251* | 2011 |
| Long non‐coding RNA modifies chromatin: epigenetic silencing by long non‐coding RNAs A Saxena, P Carninci Bioessays 33 (11), 830-839, 2011 | 242 | 2011 |
| Transcriptional and functional analysis of CD1c+ human dendritic cells identifies a CD163+ subset priming CD8+ CD103+ T cells P Bourdely, G Anselmi, K Vaivode, RN Ramos, Y Missolo-Koussou, ... Immunity 53 (2), 335-352. e8, 2020 | 236 | 2020 |
| FANTOM5 CAGE profiles of human and mouse samples S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ... Scientific data 4 (1), 1-10, 2017 | 229 | 2017 |
| Redefinition of the human mast cell transcriptome by deep-CAGE sequencing E Motakis, S Guhl, Y Ishizu, M Itoh, H Kawaji, M de Hoon, T Lassmann, ... Blood, The Journal of the American Society of Hematology 123 (17), e58-e67, 2014 | 208 | 2014 |
| Association of microRNAs and YRNAs with platelet function D Kaudewitz, P Skroblin, LH Bender, T Barwari, P Willeit, R Pechlaner, ... Circulation research 118 (3), 420-432, 2016 | 198 | 2016 |
| NMDA receptor regulation prevents regression of visual cortical function in the absence of Mecp2 S Durand, A Patrizi, KB Quast, L Hachigian, R Pavlyuk, A Saxena, ... Neuron 76 (6), 1078-1090, 2012 | 185 | 2012 |
| Interactive visualization and analysis of large-scale sequencing datasets using ZENBU J Severin, M Lizio, J Harshbarger, H Kawaji, CO Daub, Y Hayashizaki, ... Nature biotechnology 32 (3), 217-219, 2014 | 176 | 2014 |
| Centromere proteins Cenpa, Cenpb, and Bub3 interact with poly (ADP-ribose) polymerase-1 protein and are poly (ADP-ribosyl) ated A Saxena, R Saffery, LH Wong, P Kalitsis, KHA Choo Journal of Biological Chemistry 277 (30), 26921-26926, 2002 | 161 | 2002 |
| Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation H Morikawa, N Ohkura, A Vandenbon, M Itoh, S Nagao-Sato, H Kawaji, ... Proceedings of the National Academy of Sciences 111 (14), 5289-5294, 2014 | 141 | 2014 |
| Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing H Kawaji, M Lizio, M Itoh, M Kanamori-Katayama, A Kaiho, ... Genome research 24 (4), 708-717, 2014 | 126 | 2014 |
Carninci PieroRIKEN IMS (Yokohama, JP) and Human Technopole (Milan, IT)Verified email at postman.riken.jp
