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Julian R. Garneau
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PhageTerm: a tool for fast and accurate determination of phage termini and packaging mechanism using next-generation sequencing data
JR Garneau, F Depardieu, LC Fortier, D Bikard, M Monot
Scientific reports 7 (1), 8292, 2017
4322017
Factors Associated With Complications of Clostridium difficile Infection in a Multicenter Prospective Cohort
CN Abou Chakra, A McGeer, AC Labbé, AE Simor, WL Gold, MP Muller, ...
Clinical Infectious Diseases 61 (12), 1781-1788, 2015
672015
Characterization of temperate phages infecting Clostridium difficile isolates of human and animal origins
O Sekulovic, JR Garneau, A Néron, LC Fortier
Applied and environmental microbiology 80 (8), 2555-2563, 2014
662014
Prevention of Clostridium difficilespore formation by sub-inhibitory concentrations of tigecycline and piperacillin/tazobactam
JR Garneau, L Valiquette, LC Fortier
BMC infectious diseases 14 (1), 1-10, 2014
602014
Type I toxin-antitoxin systems contribute to the maintenance of mobile genetic elements in Clostridioides difficile
J Peltier, A Hamiot, JR Garneau, P Boudry, A Maikova, E Hajnsdorf, ...
Communications biology 3 (1), 718, 2020
532020
High prevalence and genetic diversity of large phiCD211 (phiCDIF1296T)-like prophages in Clostridioides difficile
JR Garneau, O Sekulovic, B Dupuy, O Soutourina, M Monot, LC Fortier
Applied and environmental microbiology 84 (3), e02164-17, 2018
252018
Comparative Genomics of Clostridium difficile
S Janezic, JR Garneau, M Monot
Updates on Clostridium difficile in Europe: Advances in Microbiology …, 2018
162018
High-throughput identification of viral termini and packaging mechanisms in virome datasets using PhageTermVirome
JR Garneau, V Legrand, M Marbouty, MO Press, DR Vik, LC Fortier, ...
Scientific Reports 11 (1), 18319, 2021
72021
Chromosome folding and prophage activation reveal specific genomic architecture for intestinal bacteria
Q Lamy-Besnier, A Bignaud, JR Garneau, M Titecat, DE Conti, ...
Microbiome 11 (1), 1-20, 2023
6*2023
Clostridioides difficile S-Layer Protein A (SlpA) Serves as a General Phage Receptor
ALM Royer, AA Umansky, MM Allen, JR Garneau, M Ospina-Bedoya, ...
Microbiology Spectrum 11 (2), e03894-22, 2023
52023
Multilocus variable-number tandem-repeat analysis of Clostridioides difficile clusters in ribotype 027 isolates and lack of association with clinical outcomes
JR Garneau, CN Abou Chakra, LC Fortier, AC Labbé, AE Simor, W Gold, ...
Journal of Clinical Microbiology 57 (5), 10.1128/jcm. 01724-18, 2019
42019
External validation of clinical scores to predict complications of Clostridium difficile infection
C Beauregard-Paultre, CNA Chakra, A Mcgeer, AC Labbé, AE Simor, ...
Open Forum Infectious Diseases 4 (suppl_1), S402-S402, 2017
42017
Virulence and genomic diversity among clinical isolates of ST1 (BI/NAP1/027) Clostridioides difficile
Q Dong, H Lin, MM Allen, JR Garneau, JK Sia, RC Smith, F Haro, ...
Cell Reports 42 (8), 112861, 2023
2023
Molecular and evolutionary basis of O-antigenic polysaccharide driven phage sensitivity in environmental pseudomonads
J Vacheron, CM Heiman, JR Garneau, P Kupferschmied, R deJonge, ...
bioRxiv, 2023.05. 15.539993, 2023
2023
Virulence and genomic diversity among clinical isolates of ST1 (BI/NAP1/027) Clostridioides difficile
Q Dong, H Lin, MM Allen, JR Garneau, JK Sia, RC Smith, F Haro, ...
bioRxiv, 2023.01. 12.523823, 2023
2023
High-throughput identification of viral termini and packaging mechanisms in virome datasets using PhageTermVirome (vol 11, 18319, 2021)
JR Garneau, V Legrand, M Marbouty, MO Press, DR Vik, LC Fortier, ...
SCIENTIFIC REPORTS 12 (1), 2022
2022
Rôle des prophages dans la virulence de Clostridioides difficile et développement d’un logiciel bio-informatique pour améliorer l’analyse des génomes de phages
J Garneau
2020
External validation of predictive scores for mortality following Clostridium difficile infection
C Beauregard-Paultre, CNA Chakra, A Mcgeer, AC Labbé, AE Simor, ...
Open Forum Infectious Diseases 4 (suppl_1), S401-S401, 2017
2017
Derivation and Validation of a Clinical Prediction Rule for Complications of Clostridium difficile Infection Using a Multicenter Prospective Cohort
CN Abou Chakra, A Mcgeer, AC Labbé, AE Simor, W Gold, MP Muller, ...
Open Forum Infectious Diseases 4 (Suppl 1), S401, 2017
2017
Independent Risk Factors for Recurrence of Clostridium difficile Infection: A Canadian Multicenter Prospective Cohort
CNA Chakra, A Mcgeer, AC Labbé, AE Simor, W Gold, MP Muller, J Powis, ...
Open Forum Infectious Diseases 2 (suppl_1), 917, 2015
2015
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