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Julian R. Garneau
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PhageTerm: a tool for fast and accurate determination of phage termini and packaging mechanism using next-generation sequencing data
JR Garneau, F Depardieu, LC Fortier, D Bikard, M Monot
Scientific reports 7 (1), 8292, 2017
4722017
Factors Associated With Complications of Clostridium difficile Infection in a Multicenter Prospective Cohort
CN Abou Chakra, A McGeer, AC Labbé, AE Simor, WL Gold, MP Muller, ...
Clinical Infectious Diseases 61 (12), 1781-1788, 2015
692015
Characterization of temperate phages infecting Clostridium difficile isolates of human and animal origins
O Sekulovic, JR Garneau, A Néron, LC Fortier
Applied and environmental microbiology 80 (8), 2555-2563, 2014
652014
Prevention of Clostridium difficilespore formation by sub-inhibitory concentrations of tigecycline and piperacillin/tazobactam
JR Garneau, L Valiquette, LC Fortier
BMC infectious diseases 14, 1-10, 2014
632014
Type I toxin-antitoxin systems contribute to the maintenance of mobile genetic elements in Clostridioides difficile
J Peltier, A Hamiot, JR Garneau, P Boudry, A Maikova, E Hajnsdorf, ...
Communications biology 3 (1), 718, 2020
602020
High prevalence and genetic diversity of large phiCD211 (phiCDIF1296T)-like prophages in Clostridioides difficile
JR Garneau, O Sekulovic, B Dupuy, O Soutourina, M Monot, LC Fortier
Applied and environmental microbiology 84 (3), e02164-17, 2018
272018
Comparative Genomics of Clostridium difficile
S Janezic, JR Garneau, M Monot
Updates on Clostridium difficile in Europe: Advances in Microbiology …, 2018
172018
Chromosome folding and prophage activation reveal specific genomic architecture for intestinal bacteria
Q Lamy-Besnier, A Bignaud, JR Garneau, M Titecat, DE Conti, ...
Microbiome 11 (1), 111, 2023
8*2023
High-throughput identification of viral termini and packaging mechanisms in virome datasets using PhageTermVirome
JR Garneau, V Legrand, M Marbouty, MO Press, DR Vik, LC Fortier, ...
Scientific Reports 11 (1), 18319, 2021
82021
Clostridioides difficile S-Layer Protein A (SlpA) serves as a general phage receptor
ALM Royer, AA Umansky, MM Allen, JR Garneau, M Ospina-Bedoya, ...
Microbiology Spectrum 11 (2), e03894-22, 2023
72023
Multilocus variable-number tandem-repeat analysis of Clostridioides difficile clusters in ribotype 027 isolates and lack of association with clinical outcomes
JR Garneau, CN Abou Chakra, LC Fortier, AC Labbé, AE Simor, W Gold, ...
Journal of Clinical Microbiology 57 (5), 10.1128/jcm. 01724-18, 2019
42019
External validation of clinical scores to predict complications of Clostridium difficile infection
C Beauregard-Paultre, CNA Chakra, A Mcgeer, AC Labbé, AE Simor, ...
Open Forum Infectious Diseases 4 (suppl_1), S402-S402, 2017
42017
Virulence and genomic diversity among clinical isolates of ST1 (BI/NAP1/027) Clostridioides difficile
Q Dong, H Lin, MM Allen, JR Garneau, JK Sia, RC Smith, F Haro, ...
Cell Reports 42 (8), 112861, 2023
22023
Piperacillin/Tazobactam-Lieferengpass: Zentrale Restriktion und Alternativempfehlungen als effektive Antibiotic-Stewardship-Maßnahme an einem Klinikum der Maximalversorgung
J Kessel, B Dolff, T Wichelhaus, N Keiner, M Hogardt, C Reinheimer, ...
DMW-Deutsche Medizinische Wochenschrift 143 (08), e59-e67, 2018
12018
The Response of the Honey Bee Gut Microbiota to Nosema ceranae Is Modulated by the Probiotic Pediococcus acidilactici and the Neonicotinoid Thiamethoxam
T Sbaghdi, JR Garneau, S Yersin, F Chaucheyras-Durand, M Bocquet, ...
Microorganisms 12 (1), 192, 2024
2024
Comparative Genomics of Clostridioides difficile
S Janezic, JR Garneau, M Monot
Updates on Clostridioides difficile in Europe: Advances in Microbiology …, 2024
2024
Exposure of gut bacterial isolates to the anthelminthic drugs, ivermectin and moxidectin, leads to antibiotic-like phenotypes of growth inhibition and adaptation.
J Dommann, J Keiser, J Garneau, A Gandelin, C Casanova, PM Keller, ...
bioRxiv, 2024.01. 17.575993, 2024
2024
Molecular and evolutionary basis of O-antigenic polysaccharide-driven phage sensitivity in environmental pseudomonads
CK Jordan Vacheron, Clara M Heiman, Julian R Garneau, Peter Kupferschmied ...
Microbiology Spectrum 11 (6), 2023
2023
Enrichment, Sequencing, and Identification of DNA Bacteriophages from Fecal Samples
Q Lamy-Besnier, JR Garneau
Viral Metagenomics: Methods and Protocols, 133-144, 2023
2023
Gut microbiomes of agropastoral children from the Adadle region of Ethiopia reflect their unique dietary habits
S Yersin, JR Garneau, PHH Schneeberger, KA Osman, CI Cercamondi, ...
Scientific Reports 13 (1), 21342, 2023
2023
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