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Nishant Thakur
Nishant Thakur
Verified email at nih.gov
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Cited by
Year
AVPpred: collection and prediction of highly effective antiviral peptides
N Thakur, A Qureshi, M Kumar
Nucleic acids research 40 (W1), W199-W204, 2012
2542012
AVPdb: a database of experimentally validated antiviral peptides targeting medically important viruses
A Qureshi, N Thakur, H Tandon, M Kumar
Nucleic acids research 42 (D1), D1147-D1153, 2014
2132014
IBEX: A versatile multiplex optical imaging approach for deep phenotyping and spatial analysis of cells in complex tissues
AJ Radtke, E Kandov, B Lowekamp, E Speranza, CJ Chu, A Gola, ...
Proceedings of the National Academy of Sciences 117 (52), 33455-33465, 2020
1152020
VIRmiRNA: a comprehensive resource for experimentally validated viral miRNAs and their targets
A Qureshi, N Thakur, I Monga, A Thakur, M Kumar
Database 2014, bau103, 2014
1022014
HIPdb: a database of experimentally validated HIV inhibiting peptides
A Qureshi, N Thakur, M Kumar
PloS one 8 (1), e54908, 2013
1002013
VIRsiRNAdb: a curated database of experimentally validated viral siRNA/shRNA
N Thakur, A Qureshi, M Kumar
Nucleic acids research 40 (D1), D230-D236, 2012
76*2012
A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes
O Zugasti, N Thakur, J Belougne, B Squiban, CL Kurz, J Soulé, S Omi, ...
BMC biology 14, 1-25, 2016
582016
IBEX: an iterative immunolabeling and chemical bleaching method for high-content imaging of diverse tissues
AJ Radtke, CJ Chu, Z Yaniv, L Yao, J Marr, RT Beuschel, H Ichise, A Gola, ...
Nature protocols 17 (2), 378-401, 2022
492022
Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes
K Lebrigand, LD He, N Thakur, MJ Arguel, J Polanowska, B Henrissat, ...
PLoS genetics 12 (5), e1006017, 2016
492016
VIRsiRNApred: a web server for predicting inhibition efficacy of siRNAs targeting human viruses
A Qureshi, N Thakur, M Kumar
Journal of Translational Medicine 11, 1-12, 2013
472013
HIVsirDB: a database of HIV inhibiting siRNAs
A Tyagi, F Ahmed, N Thakur, A Sharma, GPS Raghava, M Kumar
PloS one 6 (10), e25917, 2011
472011
Coordinated inhibition of C/EBP by Tribbles in multiple tissues is essential for Caenorhabditis elegans development
KW Kim, N Thakur, CA Piggott, S Omi, J Polanowska, Y Jin, N Pujol
BMC biology 14, 1-15, 2016
332016
Modulatory upregulation of an insulin peptide gene by different pathogens in C. elegans
SH Lee, S Omi, N Thakur, C Taffoni, J Belougne, I Engelmann, JJ Ewbank, ...
Virulence 9 (1), 648-658, 2018
282018
ASPsiRNA: a resource of ASP-siRNAs having therapeutic potential for human genetic disorders and algorithm for prediction of their inhibitory efficacy
I Monga, A Qureshi, N Thakur, AK Gupta, M Kumar
G3: Genes, Genomes, Genetics 7 (9), 2931-2943, 2017
192017
Clone Mapper: An Online Suite of Tools for RNAi Experiments in Caenorhabditis elegans
N Thakur, N Pujol, L Tichit, JJ Ewbank
G3: Genes, Genomes, Genetics 4 (11), 2137-2145, 2014
152014
Understanding immunity in a tissue‐centric context: Combining novel imaging methods and mathematics to extract new insights into function and dysfunction
RN Germain, AJ Radtke, N Thakur, EC Schrom, JL Hor, H Ichise, ...
Immunological Reviews 306 (1), 8-24, 2022
92022
IBEX: an open and extensible method for high content multiplex imaging of diverse tissues
AJ Radtke, CJ Chu, Z Yaniv, L Yao, J Marr, RT Beuschel, H Ichise, A Gola, ...
arXiv preprint arXiv:2107.11364, 2021
22021
ifas-1 is upregulated by fungal infection in a GPA-12 and STA-2-independent manner in the Caenorhabditis elegans epidermis
S Omi, X Zhang, N Thakur, N Pujol
Micropublication Biology 2021, 2021
22021
Integrated signaling networks in C. elegans innate immunity
N Thakur
Aix-Marseille, 2016
12016
Spatial Patterning Analysis of Cellular Ensembles (SPACE) enables statistically robust discovery of complex spatial organization at the cell and tissue level
EC Schrom, EF McCaffrey, AJ Radtke, E Speranza, L Arakkal, N Thakur, ...
bioRxiv, 2023.12. 08.570837, 2023
2023
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Articles 1–20