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Jethro S Johnson
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Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
JS Johnson, DJ Spakowicz, BY Hong, LM Petersen, P Demkowicz, ...
Nature communications 10 (1), 1-11, 2019
13832019
Longitudinal multi-omics of host–microbe dynamics in prediabetes
W Zhou, MR Sailani, K Contrepois, Y Zhou, S Ahadi, SR Leopold, ...
Nature 569 (7758), 663-671, 2019
4402019
Microbiome signatures associated with steatohepatitis and moderate to severe fibrosis in children with nonalcoholic fatty liver disease
JB Schwimmer, JS Johnson, JE Angeles, C Behling, PH Belt, I Borecki, ...
Gastroenterology 157 (4), 1109-1122, 2019
2232019
Disease dynamics over very different time-scales: foot-and-mouth disease and scrapie on the network of livestock movements in the UK
RR Kao, DM Green, J Johnson, IZ Kiss
Journal of the Royal Society Interface 4 (16), 907-916, 2007
1912007
Long noncoding RNAs in B-cell development and activation
TF Brazão, JS Johnson, J Müller, A Heger, CP Ponting, VLJ Tybulewicz
Blood, The Journal of the American Society of Hematology 128 (7), e10-e19, 2016
1282016
CGAT: computational genomics analysis toolkit
D Sims, NE Ilott, SN Sansom, IM Sudbery, JS Johnson, KA Fawcett, ...
Bioinformatics 30 (9), 1290-1291, 2014
762014
Demographic risk factors for classical and atypical scrapie in Great Britain
DM Green, J Victor, CPD Birch, J Johnson, IZ Kiss, ND McCarthy, RR Kao
The Journal of general virology 88 (Pt 12), 3486, 2007
482007
CGAT-core: A python framework for building scalable, reproducible computational biology workflows
AP Cribbs, S Luna-Valero, C George, IM Sudbery, AJ Berlanga-Taylor, ...
F1000Research 8 (377), 377, 2019
292019
The nutritional basis of seasonal selective feeding by a marine herbivorous fish
JS Johnson, KD Clements, D Raubenheimer
Marine Biology 164 (10), 201, 2017
182017
11β-hydroxysteroid dehydrogenase-1 deficiency alters the gut microbiome response to Western diet
JS Johnson, MN Opiyo, M Thomson, K Gharbi, JR Seckl, A Heger, ...
The Journal of endocrinology 232 (2), 273, 2016
182016
Longitudinal Analysis of Serum Cytokine Levels and Gut Microbial Abundance Links IL-17/IL-22 With Clostridia and Insulin Sensitivity in Humans
X Zhou, JS Johnson, D Spakowicz, W Zhou, Y Zhou, E Sodergren, ...
Diabetes 69 (8), 1833-1842, 2020
112020
Molecular analysis shows that soil fungi from ancient semi-natural woodland exist in sites converted to non-native conifer plantations
J Johnson, C Evans, N Brown, S Skeates, S Watkinson, D Bass
Forestry: An International Journal of Forest Research 87 (5), 705-717, 2014
112014
MSC: a metagenomic sequence classification algorithm
S Saha, J Johnson, S Pal, GM Weinstock, S Rajasekaran
Bioinformatics 35 (17), 2932-2940, 2019
92019
Does temperature constrain diet choice in a marine herbivorous fish?
JS Johnson, D Raubenheimer, SJ Bury, KD Clements
Marine Biology 167 (99), 99, 2020
52020
New statistical method identifies cytokines that distinguish stool microbiomes
D Yang, J Johnson, X Zhou, E Deych, B Shands, B Hanson, E Sodergren, ...
Scientific Reports 9 (1), 1-11, 2019
52019
Effect of ingestion on the stable isotope signatures of marine herbivorous fish diets
JS Johnson, D Raubenheimer, SJ Bury, KD Clements
Journal of experimental marine biology and ecology 438, 137-143, 2012
52012
The nutritional ecology of the New Zealand butterfish Odax pullus
J Johnson
PhD Thesis-University of Auckland, 2011
32011
SVants–A long-read based method for structural variation detection in bacterial genomes
BM Hanson, JS Johnson, SR Leopold, E Sodergren, GM Weinstock
bioRxiv, 822312, 2019
22019
The nutritional basis of seasonal selective feeding by a marine herbivorous fish
D Raubenheimer, K Clements, J Johnson
Springer, 2017
2017
Long non-coding RNAs in B cell development and activation
A Heger, CP Ponting, J Johnson, TF Brazão, J Müller, VLJ Tybulewicz
Blood 128 (7), 2016
2016
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Articles 1–20