| De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes MB Hufford, AS Seetharam, MR Woodhouse, KM Chougule, S Ou, J Liu, ... Science 373 (6555), 655-662, 2021 | 307 | 2021 |
| CRISPR interference and priming varies with individual spacer sequences C Xue, AS Seetharam, O Musharova, K Severinov, SJ J. Brouns, ... Nucleic acids research 43 (22), 10831-10847, 2015 | 116 | 2015 |
| CRISPR-Cas12a has widespread off-target and dsDNA-nicking effects K Murugan, AS Seetharam, AJ Severin, DG Sashital Journal of Biological Chemistry 295 (17), 5538-5553, 2020 | 102 | 2020 |
| Gapless assembly of maize chromosomes using long-read technologies J Liu, AS Seetharam, K Chougule, S Ou, KW Swentowsky, JI Gent, ... Genome Biology 21, 1-17, 2020 | 99 | 2020 |
| The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes R Masonbrink, TR Maier, U Muppirala, AS Seetharam, E Lord, PS Juvale, ... BMC genomics 20, 1-14, 2019 | 82 | 2019 |
| Whole genome phylogeny for 21 Drosophila species using predicted 2b-RAD fragments AS Seetharam, GW Stuart PeerJ 1, e226, 2013 | 73 | 2013 |
| GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations N Manchanda, JL Portwood, MR Woodhouse, AS Seetharam, ... BMC genomics 21, 1-9, 2020 | 62 | 2020 |
| Centromeric DNA facilitates nonconventional yeast genetic engineering M Cao, M Gao, CL Lopez-Garcia, Y Wu, AS Seetharam, AJ Severin, ... ACS synthetic biology 6 (8), 1545-1553, 2017 | 59 | 2017 |
| Effect of sequence depth and length in long-read assembly of the maize inbred NC358 S Ou, J Liu, KM Chougule, A Fungtammasan, AS Seetharam, JC Stein, ... Nature communications 11 (1), 2288, 2020 | 55 | 2020 |
| Insights into teleost sex determination from the Seriola dorsalis genome assembly CM Purcell, AS Seetharam, O Snodgrass, S Ortega-García, JR Hyde, ... BMC Genomics 19 (31), 2018 | 51 | 2018 |
| Molecular mapping of genomic regions harbouring QTLs for root and yield traits in sorghum (Sorghum bicolor L. Moench) Rajkumar, B Fakrudin, SP Kavil, Y Girma, SS Arun, D Dadakhalandar, ... Physiology and Molecular Biology of Plants 19 (3), 409-419., 2013 | 49 | 2013 |
| An Annotated Genome for Haliotis rufescens (Red Abalone) and Resequenced Green, Pink, Pinto, Black, and White Abalone Species RE Masonbrink, CM Purcell, SE Boles, A Whitehead, JR Hyde, ... Genome biology and evolution 11 (2), 431-438, 2019 | 46 | 2019 |
| Molecular mapping of genomic regions harboring QTLs for stalk rot resistance in sorghum PS Reddy, B Fakrudin, Rajkumar, SM Punnuri, SS Arun, ... Euphytica 159 (1–2), 191–198, 2007 | 46* | 2007 |
| A Study of Alterations in DNA Epigenetic Modifications (5mC and 5hmC) and Gene Expression Influenced by Simulated Microgravity in Human Lymphoblastoid Cells B Chowdhury, A Seetharam, Z Wang, Y Liu, AC Lossie, J Thimmapuram, ... PLoS ONE 11 (1), e0147514, 2016 | 41 | 2016 |
| A study on the distribution of 37 well conserved families of C2H2 zinc finger genes in eukaryotes A Seetharam, GW Stuart Bmc Genomics 14, 1-7, 2013 | 36 | 2013 |
| A survey of well conserved families of C2H2 zinc-finger genes in Daphnia A Seetharam, Y Bai, GW Stuart BMC genomics 11, 1-20, 2010 | 33 | 2010 |
| Sociality sculpts similar patterns of molecular evolution in two independently evolved lineages of eusocial bees WA Shell, MA Steffen, HK Pare, AS Seetharam, AJ Severin, AL Toth, ... Communications Biology 4 (1), 253, 2021 | 29 | 2021 |
| phylostratr: a framework for phylostratigraphy Z Arendsee, J Li, U Singh, A Seetharam, K Dorman, ES Wurtele Bioinformatics 35 (19), 3617-3627, 2019 | 29 | 2019 |
| Raising orphans from a metadata morass: A researcher's guide to re-use of public’omics data P Bhandary, AS Seetharam, ZW Arendsee, M Hur, ES Wurtele Plant science 267, 32-47, 2018 | 27 | 2018 |
| Microbial community sequencing analysis of the calf eye microbiota and relationship to infectious bovine keratoconjunctivitis JN Cullen, A Lithio, AS Seetharam, Y Zheng, G Li, D Nettleton, ... Veterinary Microbiology 207 (2017), 267-279, 2017 | 26 | 2017 |
Andrew J SeverinGenome Informatics Facility ManagerVerified email at iastate.edu
