Ramasubbu Sankararamakrishnan
Ramasubbu Sankararamakrishnan
Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur
Verified email at iitk.ac.in
TitleCited byYear
Genome-wide analysis of major intrinsic proteins in the tree plant Populus trichocarpa: characterization of XIP subfamily of aquaporins from evolutionary perspective
AB Gupta, R Sankararamakrishnan
BMC plant biology 9 (1), 134, 2009
1922009
Water in channel-like cavities: structure and dynamics
MS Sansom, ID Kerr, J Breed, R Sankararamakrishnan
Biophysical journal 70 (2), 693-702, 1996
1351996
Parallel helix bundles and ion channels: molecular modeling via simulated annealing and restrained molecular dynamics
ID Kerr, R Sankararamakrishnan, OS Smart, MS Sansom
Biophysical journal 67 (4), 1501-1515, 1994
1291994
Molecular dynamics simulations of water within models of ion channels
J Breed, R Sankararamakrishnan, ID Kerr, MS Sansom
Biophysical journal 70 (4), 1643-1661, 1996
1051996
Homology modeling of major intrinsic proteins in rice, maize and Arabidopsis: comparative analysis of transmembrane helix association and aromatic/arginine selectivity filters
A Bansal, R Sankararamakrishnan
BMC Structural Biology 7 (1), 27, 2007
1022007
Lone pair··· π interactions between water oxygens and aromatic residues: Quantum chemical studies based on high‐resolution protein structures and model compounds
A Jain, V Ramanathan, R Sankararamakrishnan
Protein Science 18 (3), 595-605, 2009
1012009
Geometry of proline‐containing alpha‐helices in proteins
R Sankararamakrishnan, S VISHVESHWARA
International journal of peptide and protein research 39 (4), 356-363, 1992
911992
Close Contacts between Carbonyl Oxygen Atoms and Aromatic Centers in Protein Structures: π⊙⊙⊙ π or Lone-Pair⊙⊙⊙ π Interactions?
A Jain, CS Purohit, S Verma, R Sankararamakrishnan
The Journal of Physical Chemistry B 111 (30), 8680-8683, 2007
802007
The pore domain of the nicotinic acetylcholine receptor: molecular modeling, pore dimensions, and electrostatics
R Sankararamakrishnan, C Adcock, MS Sansom
Biophysical journal 71 (4), 1659-1671, 1996
771996
Conformational studies on peptides with proline in the right‐handed α‐helical region
R Sankararamakrishnan, S Vishveshwara
Biopolymers: Original Research on Biomolecules 30 (3‐4), 287-298, 1990
641990
Anti‐apoptotic Bcl‐XL protein in complex with BH3 peptides of pro‐apoptotic Bak, Bad, and Bim proteins: Comparative molecular dynamics simulations
D Lama, R Sankararamakrishnan
Proteins: Structure, Function, and Bioinformatics 73 (2), 492-514, 2008
512008
Molecular dynamics simulations predict a tilted orientation for the helical region of dynorphin A (1–17) in dimyristoylphosphatidylcholine bilayers
R Sankararamakrishnan, H Weinstein
Biophysical journal 79 (5), 2331-2344, 2000
492000
ATCUN‐like metal‐binding motifs in proteins: Identification and characterization by crystal structure and sequence analysis
R Sankararamakrishnan, S Verma, S Kumar
PROTEINS: Structure, Function, and Bioinformatics 58 (1), 211-221, 2005
462005
Modelling membrane proteins using structural restraints
MSP Sansom, R Sankararamakrishnan, ID Kerr
Nature Structural and Molecular Biology 2 (8), 624, 1995
391995
Characterization of proline‐containing α‐helix (helix F model of bacteriorhodopsin) by molecular dynamics studies
R Sankararamakrishnan, S Vishveshwara
Proteins: Structure, Function, and Bioinformatics 15 (1), 26-41, 1993
381993
MIPModDB: a central resource for the superfamily of major intrinsic proteins
AB Gupta, RK Verma, V Agarwal, M Vajpai, V Bansal, ...
Nucleic acids research 40 (D1), D362-D369, 2011
342011
A survey of mRNA sequences with a non-AUG start codon in RefSeq database
S Tikole, R Sankararamakrishnan
Journal of Biomolecular Structure and Dynamics 24 (1), 33-41, 2006
332006
Seven-helix bundles: molecular modeling via restrained molecular dynamics.
MS Sansom, HS Son, R Sankararamakrishnan, ID Kerr, J Breed
Biophysical journal 68 (4), 1295, 1995
331995
Recognition of GPCRs by peptide ligands and membrane compartments theory: structural studies of endogenous peptide hormones in membrane environment
R Sankararamakrishnan
Bioscience reports 26 (2), 131-158, 2006
322006
Molecular modelling of Staphylococcal δ-toxin ion channels by restrained molecular dynamics
ID Kerr, DG Doak, R Sankararamakrishnan, J Breed, MSP Sansom
Protein Engineering, Design and Selection 9 (2), 161-171, 1996
321996
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