Prashant Shingate
Prashant Shingate
IMCB, A*STAR, Singapore
Verified email at imcb.a-star.edu.sg
Title
Cited by
Cited by
Year
Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties
AK Upadhyay, AR Chacko, A Gandhimathi, P Ghosh, K Harini, AP Joseph, ...
BMC plant biology 15 (1), 212, 2015
572015
3DSwap: curated knowledgebase of proteins involved in 3D domain swapping
K Shameer, PN Shingate, SCP Manjunath, M Karthika, G Pugalenthi, ...
Database 2011, 2011
372011
Analysis of domain-swapped oligomers reveals local sequence preferences and structural imprints at the linker regions and swapped interfaces
P Shingate, R Sowdhamini
PLoS One 7 (7), e39305, 2012
162012
ECMIS: computational approach for the identification of hotspots at protein-protein interfaces
P Shingate, M Manoharan, A Sukhwal, R Sowdhamini
BMC bioinformatics 15 (1), 1-10, 2014
152014
3PFDB+: improved search protocol and update for the identification of representatives of protein sequence domain families
AP Joseph, P Shingate, AK Upadhyay, R Sowdhamini
Database 2014, 2014
72014
Expansions, diversification, and interindividual copy number variations of AID/APOBEC family cytidine deaminase genes in lampreys
SJ Holland, LM Berghuis, JJ King, LM Iyer, K Sikora, H Fifield, S Peter, ...
Proceedings of the National Academy of Sciences 115 (14), E3211-E3220, 2018
62018
Energetic calculations to decipher pH-dependent oligomerization and domain swapping of proteins
P Shingate, J Warwicker, R Sowdhamini
PloS one 10 (6), e0127716, 2015
42015
The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera)
SN Pasha, KM Shafi, AG Joshi, I Meenakshi, K Harini, J Mahita, ...
Genomics 112 (1), 621-628, 2020
32020
Voltage-gated sodium channel gene repertoire of lampreys: gene duplications, tissue-specific expression and discovery of a long-lost gene
HH Zakon, W Li, NE Pillai, S Tohari, P Shingate, J Ren, B Venkatesh
Proceedings of the Royal Society B: Biological Sciences 284 (1863), 20170824, 2017
32017
A sequence data mining protocol to identify best representative sequence for protein domain families
VS Gowri, K Shameer, CCS Reddy, P Shingate, R Sowdhamini
2010 IEEE International Conference on Data Mining Workshops, 703-710, 2010
22010
IDENTIFICATION AND CONFORMATIONAL ANALYSIS OF HINGE REGIONS IN PROTElNS THAT UNDERGO DOMAIN SWAPPING
P Shingate, U Atul, U Raghvender, S R
Biomolecular Forms and Functions: A Celebration of 50 Years of the …, 2013
12013
Chromosome-level assembly of the horseshoe crab genome provides insights into its genome evolution
P Shingate, V Ravi, A Prasad, BH Tay, KM Garg, B Chattopadhyay, ...
Nature communications 11 (1), 1-13, 2020
2020
Dataset for the combined transcriptome assembly of M. oleifera and functional annotation
KM Shafi, AG Joshi, I Meenakshi, SN Pasha, K Harini, J Mahita, ...
Data in Brief, 105416, 2020
2020
Lampreys, the jawless vertebrates, contain three Pax6 genes with distinct expression in eye, brain and pancreas
V Ravi, S Bhatia, P Shingate, BH Tay, B Venkatesh, DA Kleinjan
Scientific reports 9 (1), 1-12, 2019
2019
172 Computational analysis and prediction of proteins that undergo domain swapping
P Shingate, A Upadhyay, S Khader, R Sowdhamini
Journal of Biomolecular Structure and Dynamics 33 (sup1), 112-113, 2015
2015
Albany 2015: Book of Abstracts
P Shingate, A Upadhyay, S Khader, R Sowdhamini
2012
3D DOMAIN SWAPPING: NEW INSIGHTS FROM DATA INTEGRATION AND MACHINE LEARNING APPROACHES
K Shameer, G Pugalenthi, PN Shingate, R Sowdhamini
Analysis and Prediction of Domain Swapping in Proteins
P Shingate, R Sowdhamini
Analysis of protein protein interactions with special emphasis on domain swapped proteins
P Shingate
Manipal, 0
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Articles 1–19