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Dr. Saikat Chowdhury
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Year
Comparison of human cell signaling pathway databases—evolution, drawbacks and challenges
S Chowdhury, RR Sarkar
Database 2015, 2015
1292015
Comprehensive Clinical and Molecular Characterization of KRASG12C-Mutant Colorectal Cancer
JT Henry, O Coker, S Chowdhury, JP Shen, VK Morris, A Dasari, ...
JCO Precision Oncology 5, 613-621, 2021
542021
Survival improvement for patients with metastatic colorectal cancer over twenty years
FA Zeineddine, MA Zeineddine, A Yousef, Y Gu, S Chowdhury, A Dasari, ...
NPJ Precision Oncology 7 (1), 16, 2023
402023
Structural and Logical Analysis of a Comprehensive Hedgehog Signaling Pathway to Identify Alternative Drug Targets for Glioma, Colon and Pancreatic Cancer
S Chowdhury, RN Pradhan, RR Sarkar
PLOS ONE 8 (7), e69132, 2013
282013
Implications of Intratumor Heterogeneity on Consensus Molecular Subtype (CMS) in Colorectal Cancer
S Chowdhury, M Hofree, K Lin, D Maru, S Kopetz, JP Shen
Cancers 13 (19), 4923, 2021
232021
Identification of Th1/Th2 regulatory switch to promote healing response during leishmaniasis: a computational approach
P Ganguli, S Chowdhury, S Chowdhury, RR Sarkar
Eurasip Journal on Bioinformatics and Systems Biology 2015, 1-19, 2015
172015
Oncogene addiction to GNAS in GNASR201 mutant tumors
A More, I Ito, V Haridas, S Chowdhury, Y Gu, P Dickson, N Fowlkes, ...
Oncogene 41 (35), 4159-4168, 2022
102022
Molecular basis of drug resistance in smoothened receptor: An in silico study of protein resistivity and specificity
N Sinha, S Chowdhury, RR Sarkar
Proteins: Structure, Function, and Bioinformatics 88 (3), 514-526, 2020
92020
Deciphering structural stability and binding mechanisms of potential antagonists with smoothened protein
N Sinha, S Chowdhury, RR Sarkar
Journal of Biomolecular Structure and Dynamics 36 (11), 2917-2937, 2018
82018
Drug targets and biomarker identification from computational study of human notch signaling pathway
S Chowdhury, R Sarkar
Clin. Exp. Pharmacol 3 (137), 2161-1459.1000137, 2013
82013
exploring Notch pathway to elucidate phenotypic plasticity and Intra-tumor Heterogeneity in Gliomas
S Chowdhury, RR Sarkar
Scientific reports 9 (1), 9488, 2019
72019
Temporal protein expression pattern in intracellular signalling cascade during T-cell activation: A computational study
P Ganguli, S Chowdhury, R Bhowmick, RR Sarkar
Journal of biosciences 40, 769-789, 2015
52015
Impact of KRAS mutations and co-mutations on clinical outcomes in pancreatic ductal adenocarcinoma
A Yousef, M Yousef, S Chowdhury, K Abdilleh, M Knafl, P Edelkamp, ...
NPJ Precision Oncology 8 (1), 27, 2024
42024
BIOPYDB: a dynamic human cell specific biochemical pathway database with advanced computational analyses platform
S Chowdhury, N Sinha, P Ganguli, R Bhowmick, V Singh, S Nandi, ...
Journal of Integrative Bioinformatics 15 (3), 20170072, 2018
32018
Structural Insight of NICD-MAML Interactions: Virtual Screening, Docking and Molecular Dynamics Study for Identification of Potential Inhibitor
N Sinha, S Chowdhury, RR Sarkar
Letters in Drug Design & Discovery 13 (4), 301-313, 2016
32016
Intraperitoneal paclitaxel is a safe and effective therapeutic strategy for treating mucinous appendiceal adenocarcinoma
I Ito, AMG Yousef, S Chowdhury, PN Dickson, ZA Naini, MG White, ...
Cancer Research 83 (19), 3184-3191, 2023
22023
Identification of minimal combinations of oncoproteins in notch pathway to suppress human glioblastoma
RR Sarkar, S Chowdhury
US Patent App. 14/527,628, 2016
22016
Serum Tumor Markers and Outcomes in Patients With Appendiceal Adenocarcinoma
A Yousef, M Yousef, MA Zeineddine, A More, M Fanaeian, S Chowdhury, ...
JAMA Network Open 7 (2), e240260-e240260, 2024
12024
631P Using the unique somatic mutation profile of POLE loss of proof-reading mutation helps in selection of patients who may benefit from immunotherapy
G Maddalena, FA Zeineddine, S Chowdhury, M Zeineddine, A Yousef, ...
Annals of Oncology 34, S448-S449, 2023
12023
Transcriptional Profiling and Consensus Molecular Subtype Assignment to Understand Response and Resistance to Anti–Epidermal Growth Factor Receptor Therapy in Colorectal Cancer
S Chowdhury, R Gupta, J Millstein, K Lin, V Haridas, MA Zeineddine, ...
JCO Precision Oncology 7, e2200422, 2023
12023
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Articles 1–20