|Knowledge-based protein modeling|
MS Johnson, N Srinivasan, R Sowdhamini, TL Blundell
Critical reviews in biochemistry and molecular biology 29 (1), 1-68, 1994
|Molecular evolution and domain structure of plasminogen‐related growth factors (HGF/SF and HGF1/MSP)|
LE Donate, N Srinivasan, R Sowdhamini, E Gherardi, TL Blundell, ...
Protein Science 3 (12), 2378-2394, 1994
|Stereochemical modeling of disulfide bridges. Criteria for introduction into proteins by site-directed mutagenesis|
R Sowdhamini, N Srinivasan, B Shoichet, DV Santi, C Ramakrishnan, ...
Protein Engineering, Design and Selection 3 (2), 95-103, 1989
|Conformations of disulfide bridges in proteins|
N Srinivasan, R Sowdhamini, C Ramakrishnan, P Balaram
International journal of peptide and protein research 36 (2), 147-155, 1990
|Cross genome comparisons of serine proteases in Arabidopsis and rice|
LP Tripathi, R Sowdhamini
BMC genomics 7 (1), 200, 2006
|Nanoscale organization of hedgehog is essential for long-range signaling|
N Vyas, D Goswami, A Manonmani, P Sharma, HA Ranganath, ...
Cell 133 (7), 1214-1227, 2008
|An automatic method involving cluster analysis of secondary structures for the identification of domains in proteins|
R Sowdhamini, TL Blundell
Protein Science 4 (3), 506-520, 1995
|STIFDB2: an updated version of plant stress-responsive transcription factor database with additional stress signals, stress-responsive transcription factor binding sites andá…|
M Naika, K Shameer, OK Mathew, R Gowda, R Sowdhamini
Plant and Cell Physiology 54 (2), e8-e8, 2013
|CAMPASS: a database of structurally aligned protein superfamilies|
R Sowdhamini, DF Burke, J Huang, K Mizuguchi, HA Nagarajaram, ...
Structure 6 (9), 1087-1094, 1998
|A database of globular protein structural domains: clustering of representative family members into similar folds|
R Sowdhamini, SD Rufino, TL Blundell
Folding and Design 1 (3), 209-220, 1996
|STIFDB—Arabidopsis stress responsive transcription factor dataBase|
K Shameer, S Ambika, SM Varghese, N Karaba, M Udayakumar, ...
International journal of plant genomics 2009, 2009
|100 ns molecular dynamics simulations to study intramolecular conformational changes in Bax|
C Koshy, M Parthiban, R Sowdhamini
Journal of Biomolecular Structure and Dynamics 28 (1), 71-83, 2010
|Localization of functional domains of the mitogenic toxin of Pasteurella multocida|
GD Pullinger, R Sowdhamini, AJ Lax
Infection and immunity 69 (12), 7839-7850, 2001
|Prediction of functional sites in proteins using conserved functional group analysis|
CA Innis, AP Anand, R Sowdhamini
Journal of molecular biology 337 (4), 1053-1068, 2004
|Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties|
AK Upadhyay, AR Chacko, A Gandhimathi, P Ghosh, K Harini, AP Joseph, ...
BMC plant biology 15 (1), 212, 2015
|Comparative Genomics of Odorant Binding Proteins in Anopheles gambiae, Aedes aegypti, and Culex quinquefasciatus|
M Manoharan, M Ng Fuk Chong, A Va´tinadapoulÚ, E Frumence, ...
Genome biology and evolution 5 (1), 163-180, 2013
|Molecular recognition in protein families: a database of aligned three-dimensional structures of related proteins|
JP Overington, ZY Zhu, A Šali, MS Johnson, R Sowdhamini, GV Louie, ...
Biochemical Society transactions 21 (3), 597-604, 1993
|Genome-wide survey of prokaryotic serine proteases: analysis of distribution and domain architectures of five serine protease families in prokaryotes|
LP Tripathi, R Sowdhamini
BMC genomics 9 (1), 549, 2008
|SUPFAM—a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics andá…|
SB Pandit, D Gosar, S Abhiman, S Sujatha, SS Dixit, NS Mhatre, ...
Nucleic acids research 30 (1), 289-293, 2002
|Cross genome phylogenetic analysis of human and Drosophila G protein-coupled receptors: application to functional annotation of orphan receptors|
RPR Metpally, R Sowdhamini
BMC genomics 6 (1), 106, 2005