| On modularity clustering U Brandes, D Delling, M Gaertler, R Gorke, M Hoefer, Z Nikoloski, ... IEEE transactions on knowledge and data engineering 20 (2), 172-188, 2007 | 1151 | 2007 |
| On finding graph clusterings with maximum modularity U Brandes, D Delling, M Gaertler, R Görke, M Hoefer, Z Nikoloski, ... International Workshop on Graph-Theoretic Concepts in Computer Science, 121-132, 2007 | 268 | 2007 |
| PlaNet: combined sequence and expression comparisons across plant networks derived from seven species M Mutwil, S Klie, T Tohge, FM Giorgi, O Wilkins, MM Campbell, AR Fernie, ... The Plant Cell 23 (3), 895-910, 2011 | 256 | 2011 |
| Metabolic fluxes in an illuminated Arabidopsis rosette M Szecowka, R Heise, T Tohge, A Nunes-Nesi, D Vosloh, J Huege, R Feil, ... The Plant Cell 25 (2), 694-714, 2013 | 219 | 2013 |
| Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues WL Araujo, A NUNES‐NESI, Z Nikoloski, LJ Sweetlove, AR Fernie Plant, cell & environment 35 (1), 1-21, 2012 | 215 | 2012 |
| Maximizing modularity is hard U Brandes, D Delling, M Gaertler, R Görke, M Hoefer, Z Nikoloski, ... arXiv preprint physics/0608255, 2006 | 210 | 2006 |
| Genome-wide association in tomato reveals 44 candidate loci for fruit metabolic traits C Sauvage, V Segura, G Bauchet, R Stevens, PT Do, Z Nikoloski, ... Plant physiology 165 (3), 1120-1132, 2014 | 151 | 2014 |
| Integrative comparative analyses of transcript and metabolite profiles from pepper and tomato ripening and development stages uncovers species-specific patterns of network … S Osorio, R Alba, Z Nikoloski, A Kochevenko, AR Fernie, JJ Giovannoni Plant Physiology 159 (4), 1713-1729, 2012 | 129 | 2012 |
| Inner composition alignment for inferring directed networks from short time series S Hempel, A Koseska, J Kurths, Z Nikoloski Physical review letters 107 (5), 054101, 2011 | 128 | 2011 |
| Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato S Alseekh, T Tohge, R Wendenberg, F Scossa, N Omranian, J Li, ... The Plant Cell 27 (3), 485-512, 2015 | 126 | 2015 |
| Metabolic variation between japonica and indica rice cultivars as revealed by non-targeted metabolomics C Hu, J Shi, S Quan, B Cui, S Kleessen, Z Nikoloski, T Tohge, ... Scientific reports 4, 5067, 2014 | 117 | 2014 |
| Metabolite profiling and network analysis reveal coordinated changes in grapevine water stress response U Hochberg, A Degu, D Toubiana, T Gendler, Z Nikoloski, ... BMC Plant Biology 13 (1), 1-16, 2013 | 110 | 2013 |
| Gene regulatory network inference using fused LASSO on multiple data sets N Omranian, JMO Eloundou-Mbebi, B Mueller-Roeber, Z Nikoloski Scientific reports 6, 20533, 2016 | 105 | 2016 |
| Large-scale co-expression approach to dissect secondary cell wall formation across plant species C Ruprecht, M Mutwil, F Saxe, M Eder, Z Nikoloski, S Persson Frontiers in Plant Science 2, 23, 2011 | 100 | 2011 |
| Metabolic profiling of a mapping population exposes new insights in the regulation of seed metabolism and seed, fruit, and plant relations D Toubiana, Y Semel, T Tohge, R Beleggia, L Cattivelli, L Rosental, ... PLoS Genet 8 (3), e1002612, 2012 | 99 | 2012 |
| Relationships of leaf net photosynthesis, stomatal conductance, and mesophyll conductance to primary metabolism: a multispecies meta-analysis approach J Gago, D de Menezes Daloso, CM Figueroa, J Flexas, AR Fernie, ... Plant Physiology 171 (1), 265-279, 2016 | 93 | 2016 |
| Genetic determinants of the network of primary metabolism and their relationships to plant performance in a maize recombinant inbred line population W Wen, K Li, S Alseekh, N Omranian, L Zhao, Y Zhou, Y Xiao, M Jin, ... The Plant Cell 27 (7), 1839-1856, 2015 | 90 | 2015 |
| Impact of the carbon and nitrogen supply on relationships and connectivity between metabolism and biomass in a broad panel of Arabidopsis accessions R Sulpice, Z Nikoloski, H Tschoep, C Antonio, S Kleessen, A Larhlimi, ... Plant physiology 162 (1), 347-363, 2013 | 86 | 2013 |
| Systems analysis of the response of photosynthesis, metabolism, and growth to an increase in irradiance in the photosynthetic model organism Chlamydomonas reinhardtii T Mettler, T Mühlhaus, D Hemme, MA Schöttler, J Rupprecht, A Idoine, ... The Plant Cell 26 (6), 2310-2350, 2014 | 85 | 2014 |
| Decreased nucleotide and expression diversity and modified coexpression patterns characterize domestication in the common bean E Bellucci, E Bitocchi, A Ferrarini, A Benazzo, E Biagetti, S Klie, A Minio, ... The Plant Cell 26 (5), 1901-1912, 2014 | 85 | 2014 |
