Deyou Zheng, Ph.D.
Deyou Zheng, Ph.D.
Albert Einstein College of Medicine
Verified email at
Cited by
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
nature 447 (7146), 799, 2007
Distinct factors control histone variant H3. 3 localization at specific genomic regions
AD Goldberg, LA Banaszynski, KM Noh, PW Lewis, SJ Elsaesser, ...
Cell 140 (5), 678-691, 2010
What is a gene, post-ENCODE? History and updated definition
MB Gerstein, C Bruce, JS Rozowsky, D Zheng, J Du, JO Korbel, ...
Genome research 17 (6), 669-681, 2007
Glucocorticoid receptor confers resistance to antiandrogens by bypassing androgen receptor blockade
VK Arora, E Schenkein, R Murali, SK Subudhi, J Wongvipat, MD Balbas, ...
Cell 155 (6), 1309-1322, 2013
PRC2 is recurrently inactivated through EED or SUZ12 loss in malignant peripheral nerve sheath tumors
W Lee, S Teckie, T Wiesner, L Ran, CNP Granada, M Lin, S Zhu, Z Cao, ...
Nature genetics 46 (11), 1227-1232, 2014
Androgen receptor signaling regulates DNA repair in prostate cancers
WR Polkinghorn, JS Parker, MX Lee, EM Kass, DE Spratt, PJ Iaquinta, ...
Cancer discovery 3 (11), 1245-1253, 2013
Endocardial cells form the coronary arteries by angiogenesis through myocardial-endocardial VEGF signaling
B Wu, Z Zhang, W Lui, X Chen, Y Wang, AA Chamberlain, ...
Cell 151 (5), 1083-1096, 2012
ETV1 is a lineage survival factor that cooperates with KIT in gastrointestinal stromal tumours
P Chi, Y Chen, L Zhang, X Guo, J Wongvipat, T Shamu, JA Fletcher, ...
Nature 467 (7317), 849-853, 2010
Pioneer factors govern super-enhancer dynamics in stem cell plasticity and lineage choice
RC Adam, H Yang, S Rockowitz, SB Larsen, M Nikolova, DS Oristian, ...
Nature 521 (7552), 366-370, 2015
Protein NMR spectroscopy in structural genomics
GT Montelione, D Zheng, YJ Huang, KC Gunsalus, T Szyperski
nature structural biology 7 (11), 982-985, 2000
Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution
D Zheng, A Frankish, R Baertsch, P Kapranov, A Reymond, SW Choo, ...
Genome research 17 (6), 839-851, 2007
RNA-Seq of human neurons derived from iPS cells reveals candidate long non-coding RNAs involved in neurogenesis and neuropsychiatric disorders
M Lin, E Pedrosa, A Shah, A Hrabovsky, S Maqbool, D Zheng, ...
PloS one 6 (9), e23356, 2011
ETS factors reprogram the androgen receptor cistrome and prime prostate tumorigenesis in response to PTEN loss
Y Chen, P Chi, S Rockowitz, PJ Iaquinta, T Shamu, S Shukla, D Gao, ...
Nature medicine 19 (8), 1023-1029, 2013
Identification and initial functional characterization of a human vascular cell–enriched long noncoding RNA
RD Bell, X Long, M Lin, JH Bergmann, V Nanda, SL Cowan, Q Zhou, ...
Arteriosclerosis, thrombosis, and vascular biology 34 (6), 1249-1259, 2014
Hira-dependent histone H3. 3 deposition facilitates PRC2 recruitment at developmental loci in ES cells
LA Banaszynski, D Wen, S Dewell, SJ Whitcomb, M Lin, N Diaz, ...
Cell 155 (1), 107-120, 2013
CRISPR/Cas9-mediated heterozygous knockout of the autism gene CHD8 and characterization of its transcriptional networks in cerebral organoids derived from iPS cells
P Wang, R Mokhtari, E Pedrosa, M Kirschenbaum, C Bayrak, D Zheng, ...
Molecular autism 8 (1), 11, 2017
Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability
PM Harrison, D Zheng, Z Zhang, N Carriero, M Gerstein
Nucleic acids research 33 (8), 2374-2383, 2005
An H3K36 methylation-engaging Tudor motif of polycomb-like proteins mediates PRC2 complex targeting
L Cai, SB Rothbart, R Lu, B Xu, WY Chen, A Tripathy, S Rockowitz, ...
Molecular cell 49 (3), 571-582, 2013
Pseudogene. org: a comprehensive database and comparison platform for pseudogene annotation
JE Karro, Y Yan, D Zheng, Z Zhang, N Carriero, P Cayting, P Harrrison, ...
Nucleic acids research 35 (suppl_1), D55-D60, 2007
Genome-wide maps of histone modifications unwind in vivo chromatin states of the hair follicle lineage
WH Lien, X Guo, L Polak, LN Lawton, RA Young, D Zheng, E Fuchs
Cell stem cell 9 (3), 219-232, 2011
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