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Jiaqi Guan
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A 3D generative model for structure-based drug design
S Luo, J Guan, J Ma, J Peng
Advances in Neural Information Processing Systems 34, 6229-6239, 2021
1502021
Pocket2mol: Efficient molecular sampling based on 3d protein pockets
X Peng, S Luo, J Guan, Q Xie, J Peng, J Ma
International Conference on Machine Learning, 17644-17655, 2022
1152022
3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction
J Guan, WW Qian, X Peng, Y Su, J Peng, J Ma
The Eleventh International Conference on Learning Representations, 2023
692023
Generation of synthetic electronic medical record text
J Guan, R Li, S Yu, X Zhang
2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018
562018
A method for generating synthetic electronic medical record text
J Guan, R Li, S Yu, X Zhang
IEEE/ACM transactions on computational biology and bioinformatics 18 (1 …, 2019
342019
Energy-efficient amortized inference with cascaded deep classifiers
J Guan, Y Liu, Q Liu, J Peng
arXiv preprint arXiv:1710.03368, 2017
322017
Generative hybrid representations for activity forecasting with no-regret learning
J Guan, Y Yuan, KM Kitani, N Rhinehart
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2020
282020
MolDiff: addressing the atom-bond inconsistency problem in 3D molecule diffusion generation
X Peng, J Guan, Q Liu, J Ma
arXiv preprint arXiv:2305.07508, 2023
212023
Equivariant point cloud analysis via learning orientations for message passing
S Luo, J Li, J Guan, Y Su, C Cheng, J Peng, J Ma
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2022
212022
Energy-Inspired Molecular Conformation Optimization
J Guan, WW Qian, WY Ma, J Ma, J Peng
International Conference on Learning Representations, 2021
162021
DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design
J Guan, X Zhou, Y Yang, Y Bao, J Peng, J Ma, Q Liu, L Wang, Q Gu
International Conference on Machine Learning, 11827-11846, 2023
112023
Directed weight neural networks for protein structure representation learning
J Li
arXiv preprint arXiv:2201.13299, 2022
72022
Pocket-specific 3d molecule generation by fragment-based autoregressive diffusion models
X Peng, J Guan, J Peng, J Ma
32022
Orientation-aware graph neural networks for protein structure representation learning
J Li, S Luo, C Deng, C Cheng, J Guan, L Guibas, J Ma, J Peng
22022
LinkerNet: Fragment Poses and Linker Co-Design with 3D Equivariant Diffusion
J Guan, X Peng, PQ Jiang, Y Luo, J Peng, J Ma
Advances in Neural Information Processing Systems 36, 2024
12024
Generative Hybrid Representations for Activity Forecasting with No-Regret Learning Supplementary Materials
J Guan, Y Yuan, KM Kitani, N Rhinehart
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