Daniel Spakowicz
Daniel Spakowicz
The Ohio State University College of Medicine
Verified email at osumc.edu - Homepage
Title
Cited by
Cited by
Year
The real cost of sequencing: scaling computation to keep pace with data generation
P Muir, S Li, S Lou, D Wang, DJ Spakowicz, L Salichos, J Zhang, ...
Genome biology 17 (1), 1-9, 2016
3342016
The Integrative Human Microbiome Project
TIHMPHMPRN Consortium
Nature 569, 641-648, 2019
284*2019
Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
JS Johnson, DJ Spakowicz, BY Hong, LM Petersen, P Demkowicz, ...
Nature communications 10 (1), 1-11, 2019
2742019
The production of myco-diesel hydrocarbons and their derivatives by the endophytic fungus Gliocladium roseum (NRRL 50072)
GA Strobel, WB Knighton, K Kluck, Y Ren, T Livinghouse, M Griffin, ...
Microbiology 156 (2), 3830-3833, 2010
2722010
Longitudinal multi-omics of host–microbe dynamics in prediabetes
W Zhou, MR Sailani, K Contrepois, Y Zhou, S Ahadi, SR Leopold, ...
Nature 569 (7758), 663-671, 2019
1712019
Hypoxylon sp., an endophyte of Persea indica, producing 1, 8-cineole and other bioactive volatiles with fuel potential
AR Tomsheck, GA Strobel, E Booth, B Geary, D Spakowicz, B Knighton, ...
Microbial ecology 60 (4), 903-914, 2010
1252010
Functional, structural, and chemical changes in myosin associated with hydrogen peroxide treatment of skeletal muscle fibers
E Prochniewicz, DA Lowe, DJ Spakowicz, LA Higgins, K O'Conor, ...
American Journal of Physiology-Cell Physiology 294 (2), C613-C626, 2008
1142008
Integrative personal omics profiles during periods of weight gain and loss
BD Piening, W Zhou, K Contrepois, H Röst, GJG Urban, T Mishra, ...
Cell systems 6 (2), 157-170. e8, 2018
1082018
Volatile organic compound production by organisms in the genus Ascocoryne and a re-evaluation of myco-diesel production by NRRL 50072
MA Griffin, DJ Spakowicz, TA Gianoulis, SA Strobel
Microbiology 156 (Pt 12), 3814, 2010
912010
Genomic Analysis of the Hydrocarbon-Producing, Cellulolytic, Endophytic Fungus Ascocoryne sarcoides
TA Gianoulis, MA Griffin, DJ Spakowicz, BF Dunican, CJ Alpha, A Sboner, ...
PLoS genetics 8 (3), e1002558, 2012
702012
Identification of a fungal 1, 8-cineole synthase from Hypoxylon sp. with specificity determinants in common with the plant synthases
JJ Shaw, T Berbasova, T Sasaki, K Jefferson-George, DJ Spakowicz, ...
Journal of Biological Chemistry 290 (13), 8511-8526, 2015
622015
Changes in actin structural transitions associated with oxidative inhibition of muscle contraction
E Prochniewicz, D Spakowicz, DD Thomas
Biochemistry 47 (45), 11811-11817, 2008
452008
An endophytic Myrothecium inundatum producing volatile organic compounds
D Banerjee, GA Strobel, B Booth, J Sears, D Spakowicz, S Busse
Mycosphere 1 (3), 241-247, 2010
422010
Biosynthesis and genomic analysis of medium-chain hydrocarbon production by the endophytic fungal isolate Nigrograna mackinnonii E5202H
JJ Shaw, DJ Spakowicz, RS Dalal, JH Davis, NA Lehr, BF Dunican, ...
Applied microbiology and biotechnology 99 (8), 3715-3728, 2015
372015
Change in neutrophil to lymphocyte ratio during immunotherapy treatment is a non-linear predictor of patient outcomes in advanced cancers
M Li, D Spakowicz, J Burkart, S Patel, M Husain, K He, EM Bertino, ...
Journal of cancer research and clinical oncology 145 (10), 2541-2546, 2019
302019
Endophyte strain NRRL 50072 producing volatile organics is a species of Ascocoryne
G Strobel, A Tomsheck, B Geary, D Spakowicz, S Strobel, S Mattner, ...
Mycology 1 (3), 187-194, 2010
232010
Biosynthesis of hydrocarbons and volatile organic compounds by fungi: bioengineering potential
DJ Spakowicz, SA Strobel
Applied microbiology and biotechnology 99 (12), 4943-4951, 2015
222015
Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis. Nat Commun 10: 5029
JS Johnson, DJ Spakowicz, BY Hong, LM Petersen, P Demkowicz, ...
172019
Biatriospora (Ascomycota: Pleosporales) is an ecologically diverse genus including facultative marine fungi and endophytes with biotechnological potential
M Kolařík, DJ Spakowicz, R Gazis, J Shaw, A Kubátová, A Nováková, ...
Plant systematics and evolution 303 (1), 35-50, 2017
172017
Stelliosphaerols A and B, Sesquiterpene–Polyol Conjugates from an Ecuadorian Fungal Endophyte
GC Forcina, A Castro, HR Bokesch, DJ Spakowicz, ME Legaspi, K Kucera, ...
Journal of natural products 78 (12), 3005-3010, 2015
132015
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Articles 1–20