| Robust persistence and permanence of polynomial and power law dynamical systems JD Brunner, G Craciun SIAM Journal on Applied Mathematics 78 (2), 801-825, 2018 | 25 | 2018 |
| Minimizing the number of optimizations for efficient community dynamic flux balance analysis JD Brunner, N Chia PLoS computational biology 16 (9), e1007786, 2020 | 21 | 2020 |
| Metabolite-mediated modelling of microbial community dynamics captures emergent behaviour more effectively than species–species modelling JD Brunner, N Chia Journal of the Royal Society Interface 16 (159), 20190423, 2019 | 19 | 2019 |
| On classes of reaction networks and their associated polynomial dynamical systems DF Anderson, JD Brunner, G Craciun, MD Johnston Journal of Mathematical Chemistry 58, 1895-1925, 2020 | 13 | 2020 |
| Metabolic model-based ecological modeling for probiotic design JD Brunner, N Chia Elife 13, e83690, 2024 | 1 | 2024 |
| Inferring microbial interactions with their environment from genomic and metagenomic data JD Brunner, LA Gallegos-Graves, ME Kroeger PLoS Computational Biology 19 (11), e1011661, 2023 | 1 | 2023 |
| Confidence in the dynamic spread of epidemics under biased sampling conditions J Brunner, N Chia PeerJ 8, e9758, 2020 | 1 | 2020 |
| Combining Compositional Data Sets Introduces Error in Covariance Network Reconstruction JD Brunner, AJ Robinson, PSG Chain ISME Communications, ycae057, 2024 | | 2024 |
| Is Transkingdom Network Analysis Possible? JD Brunner, AJ Robinson, PSG Chain arXiv preprint arXiv:2311.04357, 2023 | | 2023 |
| FriendlyNets J Brunner Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2023 | | 2023 |
| MetConSIN J Brunner Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2023 | | 2023 |
| A dynamical system model for predicting gene expression from the epigenome J Brunner, J Kim, T Downing, E Mjolsness, KM Kober arXiv preprint arXiv:2008.01126, 2020 | | 2020 |
| Confidence in the dynamic spread of epidemics under biased sampling conditions (preprint) JD Brunner, N Chia | | 2020 |
| Investigating the role of pairwise interactions in microbial community assembly J Brunner, N Chia APS March Meeting Abstracts 2019, P63. 012, 2019 | | 2019 |
| Polynomial Dynamical Systems & Interaction Network Models JD Brunner The University of Wisconsin-Madison, 2018 | | 2018 |
| Notes on Computational Mathematics J Brunner | | 2013 |
| Uncovering the dynamically changing interaction networks of microbial ecosystems. JD Brunner, M Kroeger | | |
| S1 Text: Existence of desired optimal basis. JD Brunner, N Chia | | |
| STATEMENT OF RESEARCH INTERESTS J BRUNNER | | |
| Permanence of Reaction Network Models J Brunner | | |
Nicholas ChiaData Science and LearningVerified email at anl.gov
