Junfeng Xia
Junfeng Xia
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Prediction of protein-protein interactions from amino acid sequences with ensemble extreme learning machines and principal component analysis
ZH You, YK Lei, L Zhu, J Xia, B Wang
BMC bioinformatics 14 (S8), S10, 2013
BRAF L597 mutations in melanoma are associated with sensitivity to MEK inhibitors
KB Dahlman, J Xia, K Hutchinson, C Ng, D Hucks, P Jia, M Atefi, Z Su, ...
Cancer Discovery 2 (9), 791-797, 2012
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
JF Xia, XM Zhao, J Song, DS Huang
BMC bioinformatics 11 (1), 174, 2010
Prediction of Protein-Protein Interactions from Protein Sequence Using Local Descriptors
L Yang, JF Xia, J Gui
Protein and Peptide Letters 17 (9), 1085-1090, 2010
Sequence-based prediction of protein-protein interactions by means of rotation forest and autocorrelation descriptor
JF Xia, K Han, DS Huang
Protein and Peptide Letters 17 (1), 137-145, 2010
Automatic classification for field crop insects via multiple-task sparse representation and multiple-kernel learning
C Xie, J Zhang, R Li, J Li, P Hong, J Xia, P Chen
Computers and Electronics in Agriculture 119, 123-132, 2015
Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives
Q Wang, J Xia, P Jia, W Pao, Z Zhao
Briefings in Bioinformatics, 2012
MET exon 14 skipping in non-small cell lung cancer
RS Heist, HS Shim, S Gingipally, M Mino-Kenudson, L Le, JF Gainor, ...
The oncologist 21 (4), 481, 2016
A meta-analysis of somatic mutations from next generation sequencing of 241 melanomas: a road map for the study of genes with potential clinical relevance
J Xia, P Jia, KE Hutchinson, KB Dahlman, D Johnson, J Sosman, W Pao, ...
Molecular cancer therapeutics 13 (7), 1918-1928, 2014
Investigating the relationship of DNA methylation with mutation rate and allele frequency in the human genome
J Xia, L Han, Z Zhao
BMC Genomics 13 (Suppl 8), S7, 2012
Predicting protein–protein interactions from protein sequences using meta predictor
JF Xia, XM Zhao, DS Huang
Amino acids 39 (5), 1595-1599, 2010
Predicting protein–protein interactions from sequence using correlation coefficient and high-quality interaction dataset
MG Shi, JF Xia, XL Li, DS Huang
Amino acids 38 (3), 891-899, 2010
Next-generation sequencing of paired tyrosine kinase inhibitor-sensitive and-resistant EGFR mutant lung cancer cell lines identifies spectrum of DNA changes associated with …
P Jia, H Jin, CB Meador, J Xia, K Ohashi, L Liu, V Pirazzoli, KB Dahlman, ...
Genome research 23 (9), 1434-1445, 2013
Functional complementation between transcriptional methylation regulation and post-transcriptional microRNA regulation in the human genome
Z Su, J Xia, Z Zhao
BMC Genomics 12 (Suppl 5), S15, 2011
Comparison and integration of computational methods for deleterious synonymous mutation prediction
N Cheng, M Li, L Zhao, B Zhang, Y Yang, CH Zheng, J Xia
Briefings in Bioinformatics 21 (3), 970-981, 2020
GAERF: predicting lncRNA-disease associations by graph auto-encoder and random forest
QW Wu, JF Xia, JC Ni, CH Zheng
Briefings in Bioinformatics, 2021
Prediction of circRNA-disease associations based on inductive matrix completion
M Li, M Liu, Y Bin, J Xia
BMC medical genomics 13 (5), 1-13, 2020
BBPpred: Sequence-Based Prediction of Blood-Brain Barrier Peptides with Feature Representation Learning and Logistic Regression
R Dai, W Zhang, W Tang, E Wynendaele, Q Zhu, Y Bin, B De Spiegeleer, ...
Journal of Chemical Information and Modeling 61 (1), 525-534, 2021
Do cancer proteins really interact strongly in the human protein–protein interaction network?
J Xia, J Sun, P Jia, Z Zhao
Computational biology and chemistry 35 (3), 121-125, 2011
Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer
TD O’Brien, P Jia, J Xia, U Saxena, H Jin, H Vuong, P Kim, Q Wang, ...
Methods 83, 118-127, 2015
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