Genome evolution across 1,011 Saccharomyces cerevisiae isolates J Peter, M De Chiara, A Friedrich, JX Yue, D Pflieger, A Bergström, ... Nature 556 (7701), 339-344, 2018 | 889 | 2018 |
Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps C Belser, B Istace, E Denis, M Dubarry, FC Baurens, C Falentin, M Genete, ... Nature plants 4 (11), 879-887, 2018 | 353 | 2018 |
De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing MHW Schmidt, A Vogel, AK Denton, B Istace, A Wormit, H van de Geest, ... The Plant Cell 29 (10), 2336-2348, 2017 | 216 | 2017 |
de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer B Istace, A Friedrich, L d'Agata, S Faye, E Payen, O Beluche, C Caradec, ... Gigascience 6 (2), giw018, 2017 | 153 | 2017 |
Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing C Belser, FC Baurens, B Noel, G Martin, C Cruaud, B Istace, N Yahiaoui, ... Communications biology 4 (1), 1047, 2021 | 109 | 2021 |
Long-read assembly of the Brassica napus reference genome Darmor-bzh M Rousseau-Gueutin, C Belser, C Da Silva, G Richard, B Istace, ... GigaScience 9 (12), giaa137, 2020 | 71 | 2020 |
Population genomics of apricots unravels domestication history and adaptive events A Groppi, S Liu, A Cornille, S Decroocq, QT Bui, D Tricon, C Cruaud, ... Nature Communications 12 (1), 3956, 2021 | 60 | 2021 |
De novo assembly and annotation of three Leptosphaeria genomes using Oxford Nanopore MinION sequencing F Dutreux, C Da Silva, L d’Agata, A Couloux, EJ Gay, B Istace, N Lapalu, ... Scientific data 5 (1), 1-11, 2018 | 57 | 2018 |
Hapo-G, haplotype-aware polishing of genome assemblies with accurate reads JM Aury, B Istace NAR genomics and bioinformatics 3 (2), lqab034, 2021 | 42 | 2021 |
Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data L Lima, C Marchet, S Caboche, C Da Silva, B Istace, JM Aury, H Touzet, ... Briefings in bioinformatics 21 (4), 1164-1181, 2020 | 41 | 2020 |
Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding JM Aury, S Engelen, B Istace, C Monat, P Lasserre-Zuber, C Belser, ... Gigascience 11, giac034, 2022 | 31 | 2022 |
Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp S Farhat, P Le, E Kayal, B Noel, E Bigeard, E Corre, F Maumus, I Florent, ... BMC biology 19, 1-21, 2021 | 28 | 2021 |
Two large reciprocal translocations characterized in the disease resistance-rich burmannica genetic group of Musa acuminata M Dupouy, FC Baurens, P Derouault, C Hervouet, C Cardi, C Cruaud, ... Annals of botany 124 (2), 319-329, 2019 | 19 | 2019 |
Sequencing and Chromosome-Scale Assembly of Plant Genomes, Brassica rapa as a Use Case B Istace, C Belser, C Falentin, K Labadie, F Boideau, G Deniot, L Maillet, ... Biology 10 (8), 732, 2021 | 16 | 2021 |
BiSCoT: improving large eukaryotic genome assemblies with optical maps B Istace, C Belser, JM Aury PeerJ 8, e10150, 2020 | 13 | 2020 |
Reconstructing the Gigabase Plant Genome of Solanum pennellii using Nanopore Sequencing MHW Schmidt, A Vogel, AK Denton, B Istace, A Wormit, H van de Geest, ... bioRxiv, 129148, 2017 | 10 | 2017 |
Chromosome-scale assembly of the yellow mealworm genome E Eleftheriou, JM Aury, B Vacherie, B Istace, C Belser, B Noel, Y Moret, ... Open Research Europe 1, 2021 | 9 | 2021 |
Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence N Guérin, M Ciccarella, E Flamant, P Frémont, S Mangenot, B Istace, ... Communications Biology 5 (1), 983, 2022 | 8 | 2022 |
Comparative assessment of long-read error-correction software applied to rna-sequencing data L Lima, C Marchet, S Caboche, C Da Silva, B Istace, JM Aury, H Touzet, ... BioRxiv, 476622, 2018 | 7 | 2018 |
Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detection A Canaguier, R Guilbaud, E Denis, G Magdelenat, C Belser, B Istace, ... BMC genomics 23 (1), 317, 2022 | 6 | 2022 |