Nithin C

Cited by

	All	Since 2019
Citations	753	645
h-index	14	14
i10-index	18	18

160

120

20122013201420152016201720182019202020212022202320243 3 6 4 21 25 43 57 82 157 153 147 49

Public access

View all

17 articles

0 articles

available

not available

Based on funding mandates

Co-authors

Janusz BujnickiProfessor of Biology, International Institute of Molecular and Cell Biology in WarsawVerified email at iimcb.gov.pl
Sunandan MukherjeeInternational Institute of Molecular and Cell Biology in Warsaw, PolandVerified email at iimcb.gov.pl
Pritha GhoshSenior Clinical Scientist, ConcertAIVerified email at concertai.com
Ranjit BahadurProfessor, Department of Biotechnology, IIT Kharagpur, IndiaVerified email at hijli.iitkgp.ernet.in
Tomasz Krzysztof WireckiPostdoctoral Researcher, Institute of Molecular and Cell Biology in WarsawVerified email at iimcb.gov.pl
Jolly BasakDepartment of Biotechnology, Visva- Bharati, Santiniketan, WB, IndiaVerified email at visva-bharati.ac.in
Danny IncarnatoAssistant Professor, University of GroningenVerified email at rug.nl
Amita BarikAssistant Professor, Department of Biotechnology, NIT DurgapurVerified email at nitdgp.ac.in
Amal ThomasUniversity of Southern CaliforniaVerified email at usc.edu
Michał BonieckiInternational Institute of Molecular and Cell Biology in WarsawVerified email at genesilico.pl
Dr. Nisha Patwa, Ph.DMontana State UniversityVerified email at montana.edu
Astha JoshiPostdoc Research Associate, Washington Uni of St. LouisVerified email at stanford.edu
Shi-Jie ChenUniversity of Missouri-ColumbiaVerified email at missouri.edu
Dong ZhangZhejiang UniversityVerified email at zju.edu.cn
Maciej AntczakAssociate Professor at Institute of Computing Science, Poznan University of TechnologyVerified email at cs.put.poznan.pl
Marta SzachniukInstitute of Computing Science, Poznan University of TechnologyVerified email at cs.put.poznan.pl
Tomasz ZokPoznan University of TechnologyVerified email at cs.put.poznan.pl
Eric WesthofArchitecture et Réactivité de l'ARN Université de Strasbourg Institut de biologieVerified email at unistra.fr
Zhichao (Chichau) MiaoGuangzhou Laboratory, Guangzhou Medical UniversityVerified email at gzlab.ac.cn
Mariusz PopendaDr chemii, PANVerified email at ibch.poznan.pl

Nithin C

Other namesChandran Nithin, Nithin Chandran

Assistant Professor (adiunkt), Biological and Chemical Research Centre, Department of Chemistry

Verified email at cnbc.uw.edu.pl - Homepage

Computational Biology Bioinformatics Structural Biology RNA Molecular modeling


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements I Manfredonia, C Nithin, A Ponce-Salvatierra, P Ghosh, TK Wirecki, ... Nucleic Acids Research, gkaa1053, 2020	219*	2020
Targeting non-coding RNAs in plants with the CRISPR-Cas technology is a challenge yet worth accepting J Basak, C Nithin Frontiers in plant science 6, 166365, 2015	65	2015
QRNAS: software tool for refinement of nucleic acid structures J Stasiewicz, S Mukherjee, C Nithin, JM Bujnicki BMC Structural Biology 19 (5), 1-11, 2019	57	2019
Bioinformatics tools and benchmarks for computational docking and 3D structure prediction of RNA-protein complexes C Nithin, P Ghosh, JM Bujnicki Genes 9 (Computational Analysis of RNA Structure), 432, 2018	44	2018
A protein–RNA docking benchmark (I): Nonredundant cases A Barik, C Nithin, P Manasa, RP Bahadur Proteins: Structure, Function, and Bioinformatics 80 (7), 1866-1871, 2012	43	2012
Molecular architecture of protein-RNA recognition sites A Barik, C Nithin, SP Pilla, RP Bahadur Journal of Biomolecular Structure and Dynamics, 1-14, 2015	41	2015
Computational modeling of RNA 3D structure based on experimental data A Ponce-Salvatierra, Astha, K Merdas, C Nithin, P Ghosh, S Mukherjee, ... Bioscience Reports, 10.1042/BSR20180430, 2019	40	2019
Probing binding hot spots at protein–RNA recognition sites A Barik, C Nithin, NBR Karampudi, S Mukherjee, RP Bahadur Nucleic acids research 44 (2), e9-e9, 2016	37	2016
Genome-wide identification of miRNAs and lncRNAs in Cajanus cajan C Nithin, A Thomas, J Basak, RP Bahadur BMC genomics 18, 1-14, 2017	34	2017
A non‐redundant protein–RNA docking benchmark version 2.0 C Nithin, S Mukherjee, RP Bahadur Proteins: Structure, Function, and Bioinformatics 85 (2), 256–267, 2017	34	2017
Computational prediction of miRNAs and their targets in Phaseolus vulgaris using simple sequence repeat signatures C Nithin, N Patwa, A Thomas, RP Bahadur, J Basak BMC plant biology 15, 1-16, 2015	30	2015
Modeling of Three-Dimensional RNA Structures Using SimRNA TK Wirecki, C Nithin, S Mukherjee, JM Bujnicki, MJ Boniecki Protein Structure Prediction (Part of the Methods in Molecular Biology book …, 2020	16	2020
Constrained peptides mimic a viral suppressor of RNA silencing A Kuepper, NM McLoughlin, S Neubacher, A Yeste-Vázquez, ... Nucleic acids research 49 (22), 12622-12633, 2021	15	2021
Identification and characterization of differentially expressed Phaseolus vulgaris miRNAs and their targets during mungbean yellow mosaic India virus infection reveals new … N Patwa, C Nithin, RP Bahadur, J Basak Genomics 111 (6), 1333-1342, 2018	15	2018
MAPIYA contact map server for identification and visualization of molecular interactions in proteins and biological complexes AE Badaczewska-Dawid, C Nithin, K Wroblewski, M Kurcinski, S Kmiecik Nucleic Acids Research 50 (W1), W474-W482, 2022	13	2022
Computational pipeline for reference-free comparative analysis of RNA 3D structures applied to SARS-CoV-2 UTR models J Gumna, M Antczak, RW Adamiak, JM Bujnicki, SJ Chen, F Ding, ... International Journal of Molecular Sciences 23 (17), 9630, 2022	12*	2022
A structure-based model for the prediction of protein-RNA binding affinity C Nithin, S Mukherjee, RP Bahadur RNA, doi:10.1261/rna.071779.119, 2019	11	2019
RNA and DNA G-quadruplexes bind to human dicer and inhibit its activity N Koralewska, A Szczepanska, K Ciechanowska, M Wojnicka, ... Cellular and Molecular Life Sciences 78 (7), 3709-3724, 2021	10	2021
Dissecting water binding sites at protein–protein interfaces: a lesson from the atomic structures in the Protein Data Bank S Mukherjee, C Nithin, Y Divakaruni, RP Bahadur Journal of Biomolecular Structure and Dynamics 37 (5), 1204-1219, 2019	7	2019
Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26 A Salerno-Kochan, A Horn, P Ghosh, C Nithin, A Kościelniak, A Meindl, ... Life Science Alliance 5 (8), 2022	3	2022

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors