| Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease VB Dubinkina, AV Tyakht, VY Odintsova, KS Yarygin, BA Kovarsky, ... Microbiome 5, 1-14, 2017 | 411 | 2017 |
| Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis VB Dubinkina, DS Ischenko, VI Ulyantsev, AV Tyakht, DG Alexeev BMC bioinformatics 17, 1-11, 2016 | 97 | 2016 |
| Multiple stable states in microbial communities explained by the stable marriage problem A Goyal, V Dubinkina, S Maslov The ISME journal 12 (12), 2823-2834, 2018 | 88 | 2018 |
| Ecology-guided prediction of cross-feeding interactions in the human gut microbiome A Goyal, T Wang, V Dubinkina, S Maslov Nature communications 12 (1), 1335, 2021 | 79 | 2021 |
| Multistability and regime shifts in microbial communities explained by competition for essential nutrients V Dubinkina, Y Fridman, PP Pandey, S Maslov Elife 8, e49720, 2019 | 74 | 2019 |
| A cross-study analysis of drug response prediction in cancer cell lines F Xia, J Allen, P Balaprakash, T Brettin, C Garcia-Cardona, A Clyde, ... Briefings in bioinformatics 23 (1), bbab356, 2022 | 73 | 2022 |
| MetaFast: fast reference-free graph-based comparison of shotgun metagenomic data VI Ulyantsev, SV Kazakov, VB Dubinkina, AV Tyakht, DG Alexeev Bioinformatics 32 (18), 2760-2767, 2016 | 65 | 2016 |
| Evidence for a multi-level trophic organization of the human gut microbiome T Wang, A Goyal, V Dubinkina, S Maslov PLoS computational biology 15 (12), e1007524, 2019 | 61 | 2019 |
| Complementary resource preferences spontaneously emerge in diauxic microbial communities Z Wang, A Goyal, V Dubinkina, AB George, T Wang, Y Fridman, S Maslov Nature communications 12 (1), 6661, 2021 | 32 | 2021 |
| Gut Microbiome-Host Metabolome Homeostasis upon Exposure to PFOS and GenX in Male Mice F Rashid, V Dubinkina, S Ahmad, S Maslov, JMK Irudayaraj Toxics 11 (3), 281, 2023 | 19 | 2023 |
| Culturing of a complex gut microbial community in mucin-hydrogel carriers reveals strain-and gene-associated spatial organization X Jin, FB Yu, J Yan, AM Weakley, V Dubinkina, X Meng, KS Pollard Nature Communications 14 (1), 3510, 2023 | 14 | 2023 |
| Specific features of the enteric microbiota composition in patients with alcoholic liver cirrhosis NV Shalikiani, IG Bakulin, VB Dubinkina, DS Ishchenko, DG Alexeev, ... Terapevticheskii arkhiv 87 (12), 59-65, 2015 | 12* | 2015 |
| Metagenomic analysis of taxonomic and functional changes in gut microbiota of patients with alcoholic dependence syndrome VB Dubinkina, AV Tyakht, EN Ilina, DS Ischenko, BA Kovarsky, ... Biomeditsinskaya khimiya 61 (6), 742-749, 2015 | 11 | 2015 |
| Bottlenecks, modularity, and the neural control of behavior A Nande, V Dubinkina, R Ravasio, GH Zhang, GJ Berman Frontiers in behavioral neuroscience 16, 835753, 2022 | 8 | 2022 |
| Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis AV Tyakht, VB Dubinkina, VY Odintsova, KS Yarygin, BA Kovarsky, ... Data in brief 11, 98-102, 2017 | 6 | 2017 |
| Accurate estimation of intraspecific microbial gene content variation in metagenomic data with MIDAS v3 and StrainPGC BJ Smith, C Zhao, V Dubinkina, X Jin, L Zahavi, S Shoer, ... bioRxiv, 2024.04. 10.588779, 2024 | 4 | 2024 |
| FUN-PROSE: A deep learning approach to predict condition-specific gene expression in fungi A Nambiar, V Dubinkina, S Liu, S Maslov PLoS computational biology 19 (11), e1011563, 2023 | 4 | 2023 |
| A transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains V Dubinkina, S Bhogale, PH Hsieh, P Dibaeinia, A Nambiar, S Maslov, ... Microbiology Spectrum 12 (1), e02536-23, 2024 | 3 | 2024 |
| Alternative stable states in a model of microbial community limited by multiple essential nutrients V Dubinkina, Y Fridman, P Pandey, S Maslov arXiv preprint arXiv:1810.04726, 2018 | 3 | 2018 |
| P794 Alterations of intestinal microbiota in ulcerative colitis N Danilova, S Abdulkhakov, T Grigoryeva, V Dubinkina, V Odintsova, ... Journal of Crohn's and Colitis 11 (suppl_1), S486-S486, 2017 | 2 | 2017 |
Sergei MaslovProfessor of Bioengineering and Physics, University of Illinois Urbana-ChampaignVerified email at illinois.edu
