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Veronika Dubinkina
Veronika Dubinkina
University of Illinois at Urbana-Champaign
Verified email at phystech.edu
Title
Cited by
Cited by
Year
Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease
VB Dubinkina, AV Tyakht, VY Odintsova, KS Yarygin, BA Kovarsky, ...
Microbiome 5 (1), 1-14, 2017
2052017
Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis
VB Dubinkina, DS Ischenko, VI Ulyantsev, AV Tyakht, DG Alexeev
BMC bioinformatics 17 (1), 1-11, 2016
662016
Multiple stable states in microbial communities explained by the stable marriage problem
A Goyal, V Dubinkina, S Maslov
The ISME journal 12 (12), 2823-2834, 2018
582018
MetaFast: fast reference-free graph-based comparison of shotgun metagenomic data
VI Ulyantsev, SV Kazakov, VB Dubinkina, AV Tyakht, DG Alexeev
Bioinformatics 32 (18), 2760-2767, 2016
492016
Evidence for a multi-level trophic organization of the human gut microbiome
T Wang, A Goyal, V Dubinkina, S Maslov
PLoS computational biology 15 (12), e1007524, 2019
242019
Multistability and regime shifts in microbial communities explained by competition for essential nutrients
V Dubinkina, Y Fridman, PP Pandey, S Maslov
Elife 8, e49720, 2019
232019
A cross-study analysis of drug response prediction in cancer cell lines
F Xia, J Allen, P Balaprakash, T Brettin, C Garcia-Cardona, A Clyde, ...
Briefings in bioinformatics 23 (1), bbab356, 2022
122022
Ecology-guided prediction of cross-feeding interactions in the human gut microbiome
A Goyal, T Wang, V Dubinkina, S Maslov
Nature communications 12 (1), 1-10, 2021
122021
Specific features of the enteric microbiota composition in patients with alcoholic liver cirrhosis
NV Shalikiani, IG Bakulin, VB Dubinkina, DS Ishchenko, DG Alexeev, ...
Terapevticheskii arkhiv 87 (12), 59-65, 2015
8*2015
Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis
AV Tyakht, VB Dubinkina, VY Odintsova, KS Yarygin, BA Kovarsky, ...
Data in brief 11, 98-102, 2017
62017
Complementary resource preferences spontaneously emerge in diauxic microbial communities
Z Wang, A Goyal, V Dubinkina, AB George, T Wang, Y Fridman, S Maslov
Nature communications 12 (1), 1-12, 2021
42021
Metagenomic analysis of taxonomic and functional changes in gut microbiota of patients with alcoholic dependence syndrome
VB Dubinkina, AV Tyakht, EN Ilina, DS Ischenko, BA Kovarsky, ...
Biomeditsinskaya khimiya 61 (6), 742-749, 2015
42015
Alternative stable states in a model of microbial community limited by multiple essential nutrients
V Dubinkina, Y Fridman, P Pandey, S Maslov
arXiv preprint arXiv:1810.04726, 2018
32018
FUN-PROSE: A Deep Learning Approach to Predict Condition-Specific Gene Expression in Fungi
A Nambiar, V Dubinkina, S Liu, S Maslov
bioRxiv, 2022
2022
Bottlenecks, Modularity, and the Neural Control of Behavior
A Nande, V Dubinkina, R Ravasio, GH Zhang, GJ Berman
Frontiers in behavioral neuroscience, 117, 2022
2022
North American Travel Grant Recipient: Effect of Subacute Exposure to PFAS Compounds on Gut Microbial Functions and Liver Metabolome in Mice
F Rashid, V Dubinkina, S Maslov, J Irudayaraj
INTERNATIONAL JOURNAL OF TOXICOLOGY 41 (1), 61-61, 2022
2022
Competition-driven strategies for controlling multistable microbial communities
V Dubinkina, A Goyal, Y Fridman, P Pandey, S Maslov
Bulletin of the American Physical Society 65, 2020
2020
Abundance of key intestinal dysbiosis markers in gut metagenomes of patients with ulcerative colitis and Crohn's disease
NA Danilova, M Markelova, E Boulygina, I Vasilyev, S Abdulkhakov, ...
HELICOBACTER 22, 2017
2017
P794 Alterations of intestinal microbiota in ulcerative colitis
N Danilova, S Abdulkhakov, T Grigoryeva, V Dubinkina, V Odintsova, ...
Journal of Crohn's and Colitis 11 (suppl_1), S486-S486, 2017
2017
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Articles 1–19