Daniel Mapleson
Daniel Mapleson
Analysis Pipelines Project Leader at The Genome Analysis Centre (TGAC)
Verified email at tgac.ac.uk - Homepage
Title
Cited by
Cited by
Year
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
KK Dasmahapatra, JR Walters, AD Briscoe, JW Davey, A Whibley, ...
Nature 487 (7405), 94, 2012
8962012
The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets
MB Stocks, S Moxon, D Mapleson, HC Woolfenden, I Mohorianu, L Folkes, ...
Bioinformatics 28 (15), 2059-2061, 2012
2502012
KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
D Mapleson, G Garcia Accinelli, G Kettleborough, J Wright, BJ Clavijo
Bioinformatics 33 (4), 574-576, 2017
1352017
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
TC Mathers, Y Chen, G Kaithakottil, F Legeai, ST Mugford, ...
Genome biology 18 (1), 1-20, 2017
1042017
Finding a partner in the ocean: molecular and evolutionary bases of the response to sexual cues in a planktonic diatom
S Basu, S Patil, D Mapleson, MT Russo, L Vitale, C Fevola, F Maumus, ...
New Phytologist 215 (1), 140-156, 2017
592017
Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis …
S Patil, S Moeys, P Von Dassow, MJJ Huysman, D Mapleson, ...
BMC genomics 16 (1), 930, 2015
392015
Leveraging multiple transcriptome assembly methods for improved gene structure annotation
L Venturini, S Caim, GG Kaithakottil, DL Mapleson, D Swarbreck
GigaScience 7 (8), giy093, 2018
282018
Efficient and accurate detection of splice junctions from RNA-seq with Portcullis
D Mapleson, L Venturini, G Kaithakottil, D Swarbreck
GigaScience 7 (12), giy131, 2018
182018
MirPlex: A Tool for Identifying miRNAs in High‐Throughput sRNA Datasets Without a Genome
D Mapleson, S Moxon, T Dalmay, V Moulton
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2013
162013
RAMPART: a workflow management system for de novo genome assembly
D Mapleson, N Drou, D Swarbreck
Bioinformatics 31 (11), 1824-1826, 2015
152015
SPECTRE: a suite of phylogenetic tools for reticulate evolution
S Bastkowski, D Mapleson, A Spillner, T Wu, M Balvočiūtė, V Moulton
Bioinformatics 34 (6), 1056-1057, 2018
32018
A clonally reproducing generalist aphid pest colonises diverse host plants by rapid transcriptional plasticity of duplicated gene clusters
TC Mathers, Y Chen, G Kaithakottil, F Legeai, ST Mugford, ...
bioRxiv, 063610, 2016
32016
Processing Large-scale Small RNA Datasets in Silico
LFVM Daniel Mapleson, Irina Mohorianu, Helio Pais
Next-generation Sequencing: Current Technologies and Applications, Chapter 4, 2014
2*2014
The UEA sRNA Toolkit: A User Guide for the Perl Implementation
M Lott, D Mapleson, I Mohorianu, V Moulton, S Moxon, F Schwach
SPECTRE, 2012
12012
Correction to: Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata …
S Patil, S Moeys, P von Dassow, MJJ Huysman, D Mapleson, ...
BMC genomics 20 (1), 544, 2019
2019
Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis …
S Patil, S Moeys, P von Dassow, MJJ Huysman, D Mapleson, ...
BMC GENOMICS 20, 2019
2019
Spectre: Supplementary Material
S Bastkowski, D Mapleson, A Spillner, T Wu, M Balvociute, V Moulton
2017
SPECTRE
S Bastkowski, D Mapleson, A Spillner, V Moulton
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Articles 1–18