Firoz Ahmed
Firoz Ahmed
Assistant Professor, University of Jeddah
Verified email at uj.edu.sa - Homepage
Title
Cited by
Cited by
Year
Prediction of polyadenylation signals in human DNA sequences using nucleotide frequencies
F Ahmed, M Kumar, GPS Raghava
In Silico Biology 9 (3), 135-148, 2009
532009
Prediction of guide strand of microRNAs from its sequence and secondary structure
F Ahmed, H Ansari, G Raghava
BMC Bioinformatics 10 (1), 105, 2009
412009
Designing of Highly Effective Complementary and Mismatch siRNAs for Silencing a Gene
F Ahmed, GPS Raghava
PloS One 6 (8), e23443, 2011
402011
HIVsirDB: A Database of HIV Inhibiting siRNAs
A Tyagi, F Ahmed, N Thakur, A Sharma, GPS Raghava, M Kumar
PloS One 6 (10), e25917, 2011
382011
Comprehensive analysis of small RNA-seq data reveals that combination of miRNA with its isomiRs increase the accuracy of target prediction in Arabidopsis
F Ahmed, M Senthil-Kumar, S Lee, X Dai, KS Mysore, PX Zhao
RNA Biology, 00-00, 2015
352015
PHDcleav: a SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors
F Ahmed, R Kaundal, GPS Raghava
BMC Bioinformatics 14 (S14), S9, 2013
352013
Mining functional elements in messenger RNAs: overview, challenges, and perspectives
F Ahmed, VA Benedito, PX Zhao
Frontiers in Plant Science 2, 84, 2011
212011
Middle East respiratory syndrome: pathogenesis and therapeutic developments
H Choudhry, MA Bakhrebah, WH Abdulaal, MA Zamzami, OA Baothman, ...
Future Virology 14 (4), 237-246, 2019
152019
A molecular bridge: connecting type 2 diabetes and Alzheimer’s disease
F Ahmed, J Asghar Ansari, Z Eqbal Ansari, Q Alam, S Hua Gan, ...
CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS …, 2014
122014
Integrated network analysis reveals FOXM1 and MYBL2 as key regulators of cell proliferation in non-small cell lung cancer
F Ahmed
Frontiers in Oncology 9, 1011, 2019
112019
Bioinformatics Tools for Achieving Better Gene Silencing in Plants
F Ahmed, X Dai, PX Zhao
Springer Science and Business Media New York, 2015
82015
pssRNAit-a web server for designing effective and specific plant siRNAs with genome-wide off-target assessment
F Ahmed, M Senthil-Kumar, X Dai, VS Ramu, S Lee, KS Mysore, PX Zhao
Plant Physiology, 2020
62020
A comprehensive analysis of isomirs and their targets using high-throughput sequencing data for Arabidopsis thaliana
F Ahmed, P Zhao
Journal of Natural Science, Biology and Medicine 2 (3), 2011
62011
Investigating the pathogenic SNPs in BLM helicase and their biological consequences by computational approach
FA Alzahrani, F Ahmed, M Sharma, M Rehan, M Mahfuz, MN Baeshen, ...
Scientific Reports 10, 2020
22020
Diversity Profiling of Associated Bacteria from the Soils of Stress Tolerant Plants from Seacoast of Jeddah, Saudi Arabia
MN Baeshen, TAA Moussa, F Ahmed, AA Abulfaraj, RS Jalal, MA Majeed, ...
Applied Ecology and Environmental Research 18 (6), 8217-8231, 2020
2020
Metagenomics of Bacterial Communities Associated with the Halophytic Plant
MA Majeed, MN Baeshen, M Afifi, F Ahmed
EC Microbiology (https://www.ecronicon.com/ecmi/ECMI-16-00901.php) 16 (3), 01-10, 2020
2020
A Network-Based Analysis Reveals the Mechanism Underlying Vitamin D in Suppressing Cytokine Storm and Virus in SARS-CoV-2 Infection
F Ahmed
Frontiers in immunology 11, 2020
2020
A Comprehensive Analysis of cis-Acting RNA Elements in the SARS-CoV-2 Genome by a Bioinformatics Approach
F Ahmed, M Sharma, AA Al-Ghamdi, SM Al-Yami, AM Al-Salami, MY Refai, ...
Frontiers in genetics 11, 2020
2020
Bioinformatics Approaches to Deciphering Alien Gene Transfer: A Comprehensive Analysis
R Azad, N Mishra, F Ahmed, R Kaundal
Springer Science andBusiness Media New York, 2013
2013
Development of Bioinformatics tools for understanding RNA interference pathway.
F Ahmed
CSIR-IMTECH, Chandigarh/Jawaharlal Nehru University, New Delhi: India, 2010
2010
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Articles 1–20