Mingyang Lu
Mingyang Lu
The Jackson Laboratory; University of Maine; Tufts University School of Medicine
Verified email at jax.org - Homepage
Title
Cited by
Cited by
Year
The genome of the social amoeba Dictyostelium discoideum
L Eichinger, JA Pachebat, G Glöckner, MA Rajandream, R Sucgang, ...
Nature 435 (7038), 43-57, 2005
13632005
Implications of the hybrid epithelial/mesenchymal phenotype in metastasis
MK Jolly, M Boareto, B Huang, D Jia, M Lu, E Ben-Jacob, JN Onuchic, ...
Frontiers in oncology 5, 155, 2015
3662015
MicroRNA-based regulation of epithelial–hybrid–mesenchymal fate determination
M Lu, MK Jolly, H Levine, JN Onuchic, E Ben-Jacob
Proceedings of the National Academy of Sciences 110 (45), 18144-18149, 2013
2972013
OPUS-PSP: an orientation-dependent statistical all-atom potential derived from side-chain packing
M Lu, AD Dousis, J Ma
Journal of molecular biology 376 (1), 288-301, 2008
1662008
Crystal structure of unliganded influenza B virus hemagglutinin
Q Wang, F Cheng, M Lu, X Tian, J Ma
Journal of virology 82 (6), 3011-3020, 2008
1502008
The role of shape in determining molecular motions
M Lu, J Ma
Biophysical journal 89 (4), 2395-2401, 2005
1462005
Towards elucidating the connection between epithelial–mesenchymal transitions and stemness
MK Jolly, B Huang, M Lu, SA Mani, H Levine, E Ben-Jacob
Journal of the Royal Society Interface 11 (101), 20140962, 2014
1242014
OPUS‐Ca: A knowledge‐based potential function requiring only Cα positions
Y Wu, M Lu, M Chen, J Li, J Ma
Protein science 16 (7), 1449-1463, 2007
912007
A new method for coarse-grained elastic normal-mode analysis
M Lu, B Poon, J Ma
Journal of chemical theory and computation 2 (3), 464-471, 2006
892006
Modeling the genetic regulation of cancer metabolism: interplay between glycolysis and oxidative phosphorylation
L Yu, M Lu, D Jia, J Ma, E Ben-Jacob, H Levine, BA Kaipparettu, ...
Cancer research 77 (7), 1564-1574, 2017
842017
Jagged–Delta asymmetry in Notch signaling can give rise to a Sender/Receiver hybrid phenotype
M Boareto, MK Jolly, M Lu, JN Onuchic, C Clementi, E Ben-Jacob
Proceedings of the National Academy of Sciences 112 (5), E402-E409, 2015
762015
Tristability in cancer-associated microRNA-TF chimera toggle switch
M Lu, MK Jolly, R Gomoto, B Huang, J Onuchic, E Ben-Jacob
The journal of physical chemistry B 117 (42), 13164-13174, 2013
662013
The three-way switch operation of Rac1/ RhoA GTPase-based circuit controlling amoeboid-hybrid-mesenchymal transition
B Huang, M Lu, MK Jolly, I Tsarfaty, J Onuchic, E Ben-Jacob
Scientific Reports 4, 6449, 2014
622014
OPUS‐Rota: A fast and accurate method for side‐chain modeling
M Lu, AD Dousis, J Ma
Protein Science 17 (9), 1576-1585, 2008
612008
Interrogating the topological robustness of gene regulatory circuits by randomization
B Huang, M Lu, D Jia, E Ben-Jacob, H Levine, JN Onuchic
PLoS computational biology 13 (3), e1005456, 2017
572017
Normal mode refinement of anisotropic thermal parameters for a supramolecular complex at 3.42-Å crystallographic resolution
BK Poon, X Chen, M Lu, NK Vyas, FA Quiocho, Q Wang, J Ma
Proceedings of the National Academy of Sciences 104 (19), 7869-7874, 2007
572007
Elucidating cancer metabolic plasticity by coupling gene regulation with metabolic pathways
D Jia, M Lu, KH Jung, JH Park, L Yu, JN Onuchic, BA Kaipparettu, ...
Proceedings of the National Academy of Sciences 116 (9), 3909-3918, 2019
552019
Toward Decoding the Principles of Cancer Metastasis Circuits
M Lu, MK Jolly, J Onuchic, E Ben-Jacob
Cancer research 74 (17), 4574-4587, 2014
552014
Construction of an effective landscape for multistate genetic switches
M Lu, J Onuchic, E Ben-Jacob
Physical review letters 113 (7), 078102, 2014
512014
A minimalist network model for coarse-grained normal mode analysis and its application to biomolecular x-ray crystallography
M Lu, J Ma
Proceedings of the National Academy of Sciences 105 (40), 15358-15363, 2008
442008
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Articles 1–20