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Kristyna Kupkova
Kristyna Kupkova
Verified email at virginia.edu
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Cited by
Year
Bioinformatics strategies for taxonomy independent binning and visualization of sequences in shotgun metagenomics
K Sedlar, K Kupkova, I Provaznik
Computational and structural biotechnology journal 15, 48-55, 2017
1512017
Comparative analysis of high butanol tolerance and production in clostridia
P Patakova, J Kolek, K Sedlar, P Koscova, B Branska, K Kupkova, ...
Biotechnology Advances 36 (3), 721-738, 2018
552018
Histone H3 lysine 4 methylation signature associated with human undernutrition
R Uchiyama, K Kupkova, SJ Shetty, AS Linford, MG Pray-Grant, LE Wagar, ...
Proceedings of the National Academy of Sciences 115 (48), E11264-E11273, 2018
252018
Transcription profiling of butanol producer Clostridium beijerinckii NRRL B-598 using RNA-Seq
K Sedlar, P Koscova, M Vasylkivska, B Branska, J Kolek, K Kupkova, ...
Bmc Genomics 19, 1-13, 2018
172018
Histone H3 lysine 27 acetylation profile undergoes two global shifts in undernourished children and suggests altered one-carbon metabolism
K Kupkova, SJ Shetty, R Haque, WA Petri, DT Auble
Clinical Epigenetics 13, 1-15, 2021
82021
GenomicDistributions: fast analysis of genomic intervals with Bioconductor
K Kupkova, JV Mosquera, JP Smith, M Stolarczyk, TL Danehy, JT Lawson, ...
BMC genomics 23 (1), 299, 2022
52022
Reference-free identification of phage dna using signal processing on nanopore data
K Kupkova, K Sedlar, I Provaznik
2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017
32017
Alignment-free visualization of metagenomic data by genomic signal processing
K Kupková
Complexity 100 (3), 2014
22014
Globally elevated levels of histone H3 lysine 9 trimethylation in early infancy are associated with poor growth trajectory in Bangladeshi children
K Kupkova, SJ Shetty, MG Pray-Grant, PA Grant, R Haque, WA Petri Jr, ...
Clinical Epigenetics 15 (1), 129, 2023
12023
Genome-scale chromatin interaction dynamic measurements for key components of the RNA Pol II general transcription machinery
K Kupkova, SJ Shetty, EA Hoffman, S Bekiranov, DT Auble
bioRxiv, 2023
12023
Automated Detection of Endogenous Viral Elements in Host Genomes
JP Buchman, K Zile, C Glickman, K Kupkova, J Waldman, MA Ellison, ...
Plant and Animal Genome XXVI Conference (January 13-17, 2018), 2018
12018
Multidimensional Correlated Mutation Analysis for Protein Contact Map Prediction
K Kupkova, K Sedlar, I Provaznik
Information Technologies in Medicine: 5th International Conference, ITIB …, 2016
12016
Transcriptional Profile of Exercise-Induced Protection Against Relapse to Cocaine Seeking in a Rat Model
EB Towers, DA Shapiro, JM Abel, A Bakhti-Suroosh, K Kupkova, ...
Biological Psychiatry Global Open Science 3 (4), 734-745, 2023
2023
Abstract MP12: The Mef2c Transcription Factor Regulates The Renin Cell Identity
OE Guessoum, K Kupkova, N Sheffield, ML Sequeira Lopez, RA Gomez
Hypertension 78 (suppl_1), AMP12-AMP12, 2021
2021
Histone H3 lysine 27 acetylation profile undergoes two global shifts in undernourished children and suggests one-carbon metabolite insufficiency
K Kupkova, SJ Shetty, R Haque, WA Petri Jr, DT Auble
medRxiv, 2021.06. 11.21258783, 2021
2021
ANALYSIS OF CLOSTRIDIUM BEIJERINCKII NRRL B-598 CODING REGIONS USING RNA-SEQ DATA OF CLOSELY RELATED STRAIN
K Sedlar, K Kupkova, P Koscova, B Branska, J Kolek, P Patakova, ...
Visualization of Nanopore Sequencing Data in Metagenomics
K Kupkova, I Provaznik, K Sedlar, J Hon, T Martinek, J Zendulka
SLEEP STAGES CLASSIFICATION BASED ON PARAMETERS OF HJORTH FROM EEG SIGNALS
K Kupkova
Correlated Mutation Analysis Improvement by Proteomic Signal Processing
K Kupkova, K Sedlar, I Provaznik
POSUZOVÁNÍ SPÁNKOVÝCH STÁDIÍ Z HJORTHOVÝCH PARAMETRŮ SIGNÁLŮ EEG
PK KUPKOVÁ
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Articles 1–20