Gajendra PS Raghava

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Kumardeep ChaudharyCSIR-Institute of Genomics & Integrative Biology (IGIB)Verified email at igib.res.in
Sumeet PatiyalPostdoctoral Fellow, CDSL, NCI, NIH, USAVerified email at nih.gov
Manoj K. BhasinAssociate Professor of Pediatrics and Biomedical Informatics, Emory School of MedicineVerified email at emory.edu
Rahul KumarIndian Institute of Technology HyderabadVerified email at bt.iith.ac.in
sandeep singhScientist at ICMR-CRMCH Chandrapur (Unit of ICMR-NIIH Mumbai)Verified email at icmr.gov.in
Piyush AgrawalVisiting Postdoctoral Fellow, National Cancer Institute, NIH, USAVerified email at nih.gov
Salman Sadullah Usmani, Ph.D.Research Fellow, Albert Einstein College of Medicine, New YorkVerified email at einsteinmed.edu
Harinder SinghJ Craig Venter InstituteVerified email at jcvi.org
Sudheer Gupta3B Blackbio Biotech India Ltd.Verified email at 3bblackbio.com
Sudipto SahaAssociate Professor, Bose Institute, KolkataVerified email at jcbose.ac.in
Sandeep Kumar DhandaSt. Jude Children's Research HospitalVerified email at stjude.org
Harpreet KaurNIH - National Cancer Institute, MD, USAVerified email at nih.gov
Sherry BhallaMount SinaiVerified email at mssm.edu
Manish KumarAssociate Professor of Biophysics, Delhi University (South Campus), New DelhiVerified email at south.du.ac.in
Neelam SharmaPostdoctoral Scholar, University of California San Francisco (UCSF)Verified email at ucsf.edu
Shailesh KumarNational Institute of Plant Genome Research (NIPGR)Verified email at nipgr.ac.in
Jagat S ChauhanUniversity of OxfordVerified email at ludwig.ox.ac.uk
Hifzur Rahman AnsariAssociate Research ScientistVerified email at ngha.med.sa
Grish C VarshneyChief Scientist, CSIR Institute of Microbial Technology, Chandigarh, IndiaVerified email at imtech.res.in
Vinod KumarNational Institutes of Health / IRP/ NIAVerified email at nih.gov

Gajendra PS Raghava

Indraprastha Institute of Information Technology, IIIT-Delhi , India

Verified email at iiitd.ac.in - Homepage

Machine Learning Computational Proteomics Peptide Therapeutics Computer Science Immunoinformatics


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Prediction of continuous B‐cell epitopes in an antigen using recurrent neural network S Saha, GPS Raghava Proteins: Structure, Function, and Bioinformatics 65 (1), 40-48, 2006	1465	2006
In Silico Approach for Predicting Toxicity of Peptides and Proteins S Gupta, P Kapoor, K Chaudhary, A Gautam, R Kumar, GPS Raghava, ... PloS one 8 (9), e73957, 2013	1080	2013
ProPred: prediction of HLA-DR binding sites H Singh, GPS Raghava Bioinformatics 17 (12), 1236-1237, 2001	1023	2001
AlgPred: prediction of allergenic proteins and mapping of IgE epitopes S Saha, GPS Raghava Nucleic acids research 34 (suppl_2), W202-W209, 2006	684	2006
Identification of DNA-binding proteins using support vector machines and evolutionary profiles M Kumar, MM Gromiha, GPS Raghava BMC Bioinformatics 8, 463, 2007	519*	2007
BcePred: prediction of continuous B-cell epitopes in antigenic sequences using physico-chemical properties S Saha, GPS Raghava International conference on artificial immune systems, 197-204, 2004	500	2004
ProPred1: prediction of promiscuous MHC Class-I binding sites H Singh, GPS Raghava Bioinformatics 19 (8), 1009-1014, 2003	500	2003
Designing of interferon-gamma inducing MHC class-II binders SK Dhanda, P Vir, GPS Raghava Biology direct 8 (1), 1-15, 2013	473	2013
THPdb: Database of FDA-approved peptide and protein therapeutics SS Usmani, G Bedi, JS Samuel, S Singh, S Kalra, P Kumar, AA Ahuja, ... PloS one 12 (7), e0181748, 2017	437	2017
Prediction of CTL epitopes using QM, SVM and ANN techniques M Bhasin, GPS Raghava Vaccine 22 (23-24), 3195-3204, 2004	417	2004
ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST M Bhasin, GPS Raghava Nucleic acids research 32 (suppl_2), W414-W419, 2004	394	2004
Improved method for linear B-cell epitope prediction using Antigen’s primary sequence H Singh, HR Ansari, GPS Raghava PloS one 8 (5), e62216, 2013	336	2013
Identification of conformational B-cell Epitopes in an antigen from its primary sequence HR Ansari, GPS Raghava Immunome research 6 (1), 1-9, 2010	334	2010
Prediction of RNA binding sites in a protein using SVM and PSSM profile M Kumar, MM Gromiha, GPS Raghava Proteins: Structure, Function, and Bioinformatics 71 (1), 189-194, 2008	306	2008
Analysis and prediction of antibacterial peptides S Lata, BK Sharma, GPS Raghava BMC bioinformatics 8 (1), 1-10, 2007	306	2007
Support vector machine-based method for subcellular localization of human proteins using amino acid compositions, their order, and similarity search A Garg, M Bhasin, GPS Raghava Journal of Biological Chemistry 280 (15), 14427-14432, 2005	289	2005
CancerPPD: a database of anticancer peptides and proteins A Tyagi, A Tuknait, P Anand, S Gupta, M Sharma, D Mathur, A Joshi, ... Nucleic acids research 43 (D1), D837-D843, 2015	284	2015
Towards a consensus on datasets and evaluation metrics for developing B‐cell epitope prediction tools JA Greenbaum, PH Andersen, M Blythe, HH Bui, RE Cachau, J Crowe, ... Journal of Molecular Recognition 20 (2), 75-82, 2007	282	2007
Classification of nuclear receptors based on amino acid composition and dipeptide composition M Bhasin, GPS Raghava Journal of Biological Chemistry 279 (22), 23262-23266, 2004	282	2004
PSLpred: prediction of subcellular localization of bacterial proteins M Bhasin, A Garg, GPS Raghava Bioinformatics 21 (10), 2522-2524, 2005	281	2005

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