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Aarthi Ravikrishnan
Aarthi Ravikrishnan
Genome Institute of Singapore
Verified email at gis.a-star.edu.sg
Title
Cited by
Cited by
Year
Metagenome-wide association analysis identifies microbial determinants of post-antibiotic ecological recovery in the gut
KR Chng, TS Ghosh, YH Tan, T Nandi, IR Lee, AHQ Ng, C Li, ...
Nature ecology & evolution 4 (9), 1256-1267, 2020
1052020
Critical assessment of genome-scale metabolic networks: the need for a unified standard
A Ravikrishnan, K Raman
Briefings in bioinformatics 16 (6), 1057-1068, 2015
892015
Atopic dermatitis microbiomes stratify into ecologic dermotypes enabling microbial virulence and disease severity
ASL Tay, C Li, T Nandi, KR Chng, AK Andiappan, VS Mettu, C de Cevins, ...
Journal of Allergy and Clinical Immunology 147 (4), 1329-1340, 2021
352021
Enumerating all possible biosynthetic pathways in metabolic networks
A Ravikrishnan, M Nasre, K Raman
Scientific reports 8 (1), 9932, 2018
352018
Investigating metabolic interactions in a microbial co-culture through integrated modelling and experiments
A Ravikrishnan, LM Blank, S Srivastava, K Raman
Computational and Structural Biotechnology Journal 18, 1249-1258, 2020
342020
Genome-centric analysis of short and long read metagenomes reveals uncharacterized microbiome diversity in Southeast Asians
JS Gounot, M Chia, D Bertrand, WY Saw, A Ravikrishnan, A Low, Y Ding, ...
Nature Communications 13 (1), 6044, 2022
202022
Systems-level modelling of microbial communities: theory and practice
A Ravikrishnan, K Raman
CRC Press, 2018
172018
Long-term ecological and evolutionary dynamics in the gut microbiomes of carbapenemase-producing Enterobacteriaceae colonized subjects
JTL Kang, JJY Teo, D Bertrand, A Ng, A Ravikrishnan, M Yong, OT Ng, ...
Nature Microbiology 7 (10), 1516-1524, 2022
102022
Genome-scale model reconstruction of the methylotrophic yeast Ogataea polymorpha
UW Liebal, BA Fabry, A Ravikrishnan, CVL Schedel, S Schmitz, LM Blank, ...
BMC biotechnology 21, 1-8, 2021
92021
Metagenome-wide association analysis identifies microbial determinants of post-antibiotic ecological recovery in the gut. Nat Ecol Evol 4: 1256–1267
KR Chng, TS Ghosh, YH Tan, T Nandi, IR Lee, AHQ Ng, C Li, ...
82020
Mutual Exclusion of Methanobrevibacter Species in the Human Gut Microbiota Facilitates Directed Cultivation of a Candidatus Methanobrevibacter Intestini …
A Low, JKY Lee, JS Gounot, A Ravikrishnan, Y Ding, WY Saw, LWL Tan, ...
Microbiology Spectrum 10 (4), e00849-22, 2022
72022
Profiling microbial communities in idiopathic granulomatous mastitis
SS Ong, J Xu, CK Sim, AJ Khng, PJ Ho, PKW Kwan, A Ravikrishnan, ...
International Journal of Molecular Sciences 24 (2), 1042, 2023
52023
BugSigDB captures patterns of differential abundance across a broad range of host-associated microbial signatures
L Geistlinger, C Mirzayi, F Zohra, R Azhar, S Elsafoury, C Grieve, ...
Nature Biotechnology, 1-13, 2023
42023
BugSigDB: accelerating microbiome research through systematic comparison to published microbial signatures
L Geistlinger, C Mirzayi, F Zohra, R Azhar, S Elsafoury, C Grieve, ...
medRxiv, 2022.10. 24.22281483, 2022
22022
Unraveling microbial interactions in the gut microbiome
A Ravikrishnan, K Raman
BioRxiv, 2021.05. 17.444446, 2021
22021
Hypervirulent Klebsiella pneumoniae employs genomic island encoded toxins against bacterial competitors in the gut
YH Tan, P Arros, C Berríos-Pastén, I Wijaya, WHW Chu, Y Chen, ...
The ISME Journal 18 (1), wrae054, 2024
2024
Life stage impact on the human skin ecosystem: lipids and the microbial community
MP Pagac, B Davient, A Ravikrishnan, E Chua, A Irudayaswamy, ...
bioRxiv, 2024.01. 03.573871, 2024
2024
Method and composition for treating or decreasing gut microbiome dysbiosis induced by a prior antibiotic treatment
KR Chng, A Ravikrishnan, N Nagarajan
US Patent App. 17/367,837, 2023
2023
16S rRNA sequencing for profiling microbial communities in idiopathic granulomatous mastitis
SS Ong, J Xu, CK Sim, AJ Khng, PJ Ho, PKW Kwan, A Ravikrishnan, ...
bioRxiv, 2022.09. 30.510425, 2022
2022
Genome scale model reconstruction of the methylotrophic yeast Ogataea polymorpha
S Schmitz, UW Liebal, A Ravikrishnan, CVL Schedel, LM Blank, BE Ebert
2019
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