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Zia Fatma
Zia Fatma
Senior Scientist, Ginkgo Bioworks
Verified email at ginkgobioworks.com
Title
Cited by
Cited by
Year
TALEN outperforms Cas9 in editing heterochromatin target sites
S Jain, S Shukla, C Yang, M Zhang, Z Fatma, M Lingamaneni, S Abesteh, ...
Nature communications 12 (1), 606, 2021
812021
Model-assisted metabolic engineering of Escherichia coli for long chain alkane and alcohol production
Z Fatma, H Hartman, MG Poolman, DA Fell, S Srivastava, T Shakeel, ...
Metabolic engineering 46, 1-12, 2018
772018
Engineered Production of Short Chain Fatty Acid in Escherichia coli Using Fatty Acid Synthesis Pathway
K Jawed, AJ Mattam, Z Fatma, S Wajid, MZ Abdin, SS Yazdani
PLoS One 11 (7), e0160035, 2016
662016
Identification of long chain specific aldehyde reductase and its use in enhanced fatty alcohol production in E. coli
Z Fatma, K Jawed, AJ Mattam, SS Yazdani
Metabolic engineering 37, 35-45, 2016
572016
DNA barcode and lipid analysis of new marine algae potential for biofuel
I Ahmad, Z Fatma, SS Yazdani, S Kumar
Algal Research 2 (1), 10-15, 2013
452013
Recent advances in domesticating non‐model microorganisms
Z Fatma, JC Schultz, H Zhao
Biotechnology progress 36 (5), e3008, 2020
432020
Metabolic engineering: methodologies and applications
MJ Volk, VG Tran, SI Tan, S Mishra, Z Fatma, A Boob, H Li, P Xue, ...
Chemical reviews 123 (9), 5521-5570, 2022
382022
Development of a CRISPR/Cas9-Based Tool for Gene Deletion in Issatchenkia orientalis
VG Tran, M Cao, Z Fatma, X Song, H Zhao
Msphere 4 (3), 10.1128/msphere. 00345-19, 2019
362019
A genetic toolbox for metabolic engineering of Issatchenkia orientalis
M Cao, Z Fatma, X Song, PH Hsieh, VG Tran, WL Lyon, M Sayadi, Z Shao, ...
Metabolic engineering 59, 87-97, 2020
332020
Genome-scale metabolic reconstruction of the non-model yeast Issatchenkia orientalis SD108 and its application to organic acids production
PF Suthers, HV Dinh, Z Fatma, Y Shen, SHJ Chan, JD Rabinowitz, ...
Metabolic Engineering Communications 11, e00148, 2020
232020
A consensus-guided approach yields a heat-stable alkane-producing enzyme and identifies residues promoting thermostability
T Shakeel, M Gupta, Z Fatma, R Kumar, R Kumar, R Singh, M Sharma, ...
Journal of Biological Chemistry 293 (24), 9148-9161, 2018
222018
Heterogeneity of alkane chain length in freshwater and marine cyanobacteria
T Shakeel, Z Fatma, T Fatma, SS Yazdani
Frontiers in bioengineering and biotechnology 3, 34, 2015
192015
Comparative study of two Saccharomyces cerevisiae strains with kinetic models at genome-scale
M Hu, HV Dinh, Y Shen, PF Suthers, CJ Foster, CM Call, X Ye, J Pratas, ...
Metabolic engineering 76, 1-17, 2023
92023
An end-to-end pipeline for succinic acid production at an industrially relevant scale using Issatchenkia orientalis
VG Tran, S Mishra, SS Bhagwat, S Shafaei, Y Shen, JL Allen, BA Crosly, ...
Nature communications 14 (1), 6152, 2023
72023
Cas9-Based Metabolic Engineering of Issatchenkia orientalis for Enhanced Utilization of Cellulosic Hydrolysates
YG Lee, C Kim, N Kuanyshev, NK Kang, Z Fatma, ZY Wu, MH Cheng, ...
Journal of Agricultural and Food Chemistry 70 (38), 12085-12094, 2022
72022
Mass spectrometry-based high-throughput quantification of bioproducts in liquid culture
S Zhou, Z Fatma, P Xue, S Mishra, M Cao, H Zhao, JV Sweedler
Analytical Chemistry 95 (8), 4067-4076, 2023
62023
Proteome capacity constraints favor respiratory ATP generation
Y Shen, HV Dinh, E Cruz, CM Call, H Baron, RP Ryseck, J Pratas, ...
bioRxiv, 2022.08. 10.503479, 2022
52022
A landing pad system for multicopy gene integration in Issatchenkia orientalis
Z Fatma, SI Tan, AG Boob, H Zhao
Metabolic Engineering 78, 200-208, 2023
22023
Development of a CRISPR/Cas9-based tool for gene deletion in Issatchenkia orientalis. mSphere 4: e00345-19
VG Tran, M Cao, Z Fatma, X Song, H Zhao
22019
Mitochondrial ATP generation is more proteome efficient than glycolysis
Y Shen, HV Dinh, ER Cruz, Z Chen, CR Bartman, T Xiao, CM Call, ...
Nature Chemical Biology, 1-10, 2024
12024
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