| The tomato genome sequence provides insights into fleshy fruit evolution xx Tomato Genome Consortium Nature 485 (7400), 635, 2012 | 3189 | 2012 |
| The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions S Guo, J Zhang, H Sun, J Salse, WJ Lucas, H Zhang, Y Zheng, L Mao, ... Nature genetics 45 (1), 51-58, 2013 | 864 | 2013 |
| iTAK: a program for genome-wide prediction and classification of plant transcription factors, transcriptional regulators, and protein kinases Y Zheng, C Jiao, H Sun, HG Rosli, MA Pombo, P Zhang, M Banf, X Dai, ... Molecular plant 9 (12), 1667-1670, 2016 | 754 | 2016 |
| Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening S Zhong, Z Fei, YR Chen, Y Zheng, M Huang, J Vrebalov, R McQuinn, ... Nature biotechnology 31 (2), 154-159, 2013 | 748 | 2013 |
| High-throughput illumina strand-specific RNA sequencing library preparation S Zhong, JG Joung, Y Zheng, Y Chen, B Liu, Y Shao, JZ Xiang, Z Fei, ... Cold spring harbor protocols 2011 (8), pdb. prot5652, 2011 | 500 | 2011 |
| The draft genome of whitefly Bemisia tabaci MEAM1, a global crop pest, provides novel insights into virus transmission, host adaptation, and insecticide resistance W Chen, DK Hasegawa, N Kaur, A Kliot, PV Pinheiro, J Luan, ... BMC biology 14, 1-15, 2016 | 307 | 2016 |
| High-resolution spatiotemporal transcriptome mapping of tomato fruit development and ripening Y Shinozaki, P Nicolas, N Fernandez-Pozo, Q Ma, DJ Evanich, Y Shi, ... Nature communications 9 (1), 364, 2018 | 271 | 2018 |
| Evolution and expression analysis of the grape (Vitis vinifera L.) WRKY gene family C Guo, R Guo, X Xu, M Gao, X Li, J Song, Y Zheng, X Wang Journal of experimental botany 65 (6), 1513-1528, 2014 | 261 | 2014 |
| Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types S Guo, Y Zheng, JG Joung, S Liu, Z Zhang, OR Crasta, BW Sobral, Y Xu, ... BMC genomics 11, 1-13, 2010 | 241 | 2010 |
| Tissue-and cell-type specific transcriptome profiling of expanding tomato fruit provides insights into metabolic and regulatory specialization and cuticle formation AJ Matas, TH Yeats, GJ Buda, Y Zheng, S Chatterjee, T Tohge, L Ponnala, ... The Plant Cell 23 (11), 3893-3910, 2011 | 237 | 2011 |
| Tomato GOLDEN2-LIKE Transcription Factors Reveal Molecular Gradients That Function during Fruit Development and Ripening CV Nguyen, JT Vrebalov, NE Gapper, Y Zheng, S Zhong, Z Fei, ... The Plant Cell 26 (2), 585-601, 2014 | 215 | 2014 |
| VirusDetect: An automated pipeline for efficient virus discovery using deep sequencing of small RNAs Y Zheng, S Gao, C Padmanabhan, R Li, M Galvez, D Gutierrez, S Fuentes, ... Virology 500, 130-138, 2017 | 212 | 2017 |
| Draft genome of spinach and transcriptome diversity of 120 Spinacia accessions C Xu, C Jiao, H Sun, X Cai, X Wang, C Ge, Y Zheng, W Liu, X Sun, Y Xu, ... Nature Communications 8 (1), 15275, 2017 | 211 | 2017 |
| Cucurbit Genomics Database (CuGenDB): a central portal for comparative and functional genomics of cucurbit crops Y Zheng, S Wu, Y Bai, H Sun, C Jiao, S Guo, K Zhao, J Blanca, Z Zhang, ... Nucleic acids research 47 (D1), D1128-D1136, 2019 | 168 | 2019 |
| Transcriptomics-based screen for genes induced by flagellin and repressed by pathogen effectors identifies a cell wall-associated kinase involved in plant immunity HG Rosli, Y Zheng, MA Pombo, S Zhong, A Bombarely, Z Fei, A Collmer, ... Genome biology 14, 1-15, 2013 | 161 | 2013 |
| An NAC transcription factor controls ethylene-regulated cell expansion in flower petals H Pei, N Ma, J Tian, J Luo, J Chen, J Li, Y Zheng, X Chen, Z Fei, J Gao Plant Physiology 163 (2), 775-791, 2013 | 158 | 2013 |
| Ethylene suppresses tomato (Solanum lycopersicum) fruit set through modification of gibberellin metabolism Y Shinozaki, S Hao, M Kojima, H Sakakibara, Y Ozeki‐Iida, Y Zheng, ... The Plant Journal 83 (2), 237-251, 2015 | 151 | 2015 |
| Comprehensive tissue-specific transcriptome analysis reveals distinct regulatory programs during early tomato fruit development RJ Pattison, F Csukasi, Y Zheng, Z Fei, E van der Knaap, C Catalá Plant physiology 168 (4), 1684-1701, 2015 | 145 | 2015 |
| RhNAC2 and RhEXPA4 Are Involved in the Regulation of Dehydration Tolerance during the Expansion of Rose Petals F Dai, C Zhang, X Jiang, M Kang, X Yin, P Lü, X Zhang, Y Zheng, J Gao Plant physiology 160 (4), 2064-2082, 2012 | 145 | 2012 |
| iAssembler: a package for de novo assembly of Roche-454/Sanger transcriptome sequences Y Zheng, L Zhao, J Gao, Z Fei BMC bioinformatics 12, 1-8, 2011 | 144 | 2011 |
Zhangjun FeiBoyce Thompson InstituteVerified email at cornell.edu
