| The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans The Tabula Sapiens Consortium*, RC Jones, J Karkanias, MA Krasnow, ... Science 376 (6594), eabl4896, 2022 | 637 | 2022 |
| Miro1 regulates intercellular mitochondrial transport & enhances mesenchymal stem cell rescue efficacy T Ahmad, S Mukherjee, B Pattnaik, M Kumar, S Singh, M Kumar, ... The EMBO journal 33 (9), 994-1010, 2014 | 595 | 2014 |
| Transient non-integrative expression of nuclear reprogramming factors promotes multifaceted amelioration of aging in human cells TJ Sarkar, M Quarta, S Mukherjee, A Colville, P Paine, L Doan, CM Tran, ... Nature communications 11 (1), 1545, 2020 | 244 | 2020 |
| Computational classification of mitochondrial shapes reflects stress and redox state T Ahmad, K Aggarwal, B Pattnaik, S Mukherjee, T Sethi, BK Tiwari, ... Cell death & disease 4 (1), e461-e461, 2013 | 236 | 2013 |
| Cell types of origin of the cell-free transcriptome SK Vorperian, MN Moufarrej, ... Nature biotechnology 40 (6), 855-861, 2022 | 65 | 2022 |
| Single-cell mass cytometry reveals cross-talk between inflammation-dampening and inflammation-amplifying cells in osteoarthritic cartilage FC Grandi, R Baskar, P Smeriglio, S Murkherjee, PF Indelli, ... Science advances 6 (11), eaay5352, 2020 | 63 | 2020 |
| RNA splicing programs define tissue compartments and cell types at single-cell resolution JE Olivieri, R Dehghannasiri, PL Wang, SR Jang, A De Morree, SY Tan, ... Elife 10, e70692, 2021 | 39 | 2021 |
| The Tabula Sapiens: a single cell transcriptomic atlas of multiple organs from individual human donors Tabula Sapiens Consortium, SR Quake Biorxiv, 2021.07. 19.452956, 2021 | 34 | 2021 |
| Universal cell embeddings: A foundation model for cell biology Y Rosen, Y Roohani, A Agarwal, L Samotorčan, ... bioRxiv, 2023.11. 28.568918, 2023 | 27 | 2023 |
| Miro 1 knockdown in stem cells inhibits mitochondrial donation mediated rescue of bronchial epithelial injury T Ahmad, S Mukherjee, BR Pattnaik, M Kumar, S Singh, R Rehman, A Jha, ... Biophysical Journal 104 (2), 659a, 2013 | 22 | 2013 |
| Tabula Microcebus: A transcriptomic cell atlas of mouse lemur, an emerging primate model organism TTM Consortium bioArxiv, 2021 | 19* | 2021 |
| FIRM: Flexible integration of single-cell RNA-sequencing data for large-scale multi-tissue cell atlas datasets J Ming, Z Lin, J Zhao, X Wan, ... Briefings in Bioinformatics 23 (5), bbac167, 2022 | 16 | 2022 |
| The biology and therapeutic application of mesenchymal cells, 2 volume set K Atkinson John Wiley & Sons, 2017 | 15 | 2017 |
| Transient non-integrative nuclear reprogramming promotes multifaceted reversal of aging in human cells TJ Sarkar, M Quarta, S Mukherjee, A Colville, P Paine, L Doan, CM Tran, ... bioRxiv, 573386, 2019 | 11 | 2019 |
| Transient nonintegrative expression of nuclear reprogramming factors promotes multifaceted amelioration of aging in human cells. Nat. Commun. 11, 1545 TJ Sarkar, M Quarta, S Mukherjee, A Colville, P Paine, L Doan, CM Tran, ... | 9 | 2020 |
| Noncanonical role for Ku70/80 in the prevention of allergic airway inflammation via maintenance of airway epithelial cell organelle homeostasis R Rehman, VE Vijayakumar, A Jaiswal, V Jain, S Mukherjee, ... American Journal of Physiology-Lung Cellular and Molecular Physiology 319 (4 …, 2020 | 8 | 2020 |
| An organism-wide atlas of hormonal signaling based on the mouse lemur single-cell transcriptome S Liu, C Ezran, MFZ Wang, Z Li, K Awayan, JZ Long, I De Vlaminck, ... Nature Communications 15 (1), 2188, 2024 | 5 | 2024 |
| Mouse lemur transcriptomic atlas elucidates primate genes, physiology, disease, and evolution Tabula Microcebus Consortium, C Ezran, S Liu, J Ming, LA Guethlein, ... bioRxiv, 2022.08. 06.503035, 2022 | 5 | 2022 |
| Cell types of origin in the cell free transcriptome in human health and disease SK Vorperian, MN Moufarrej, SR Quake, TS Consortium BioRxiv, 2021 | 4 | 2021 |
| Single cell transcriptomics reveals the hidden microbiomes of human tissues G Mahmoudabadi, TS Consortium, SR Quake bioRxiv, 2022.10. 11.511790, 2022 | 2 | 2022 |
