Madhusmita Tripathy
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Introducing memory in coarse-grained molecular simulations
V Klippenstein, M Tripathy, G Jung, F Schmid, NFA van der Vegt
The Journal of Physical Chemistry B 125 (19), 4931-4954, 2021
Molecular structuring and percolation transition in hydrated sulfonated poly (ether ether ketone) membranes
M Tripathy, PBS Kumar, AP Deshpande
The Journal of Physical Chemistry B 121 (18), 4873-4884, 2017
Fluid phase coexistence in biological membrane: Insights from local nonaffine deformation of lipids
SS Iyer, M Tripathy, A Srivastava
Biophysical journal 115 (1), 117-128, 2018
Molecular origin of spatiotemporal heterogeneity in biomembranes with coexisting liquid phases: Insights from topological rearrangements and lipid packing defects
M Tripathy, SS Iyer, A Srivastava
Advances in Biomembranes and Lipid Self-Assembly 28, 87-114, 2018
Three-dimensional packing defects in lipid membrane as a function of membrane order
M Tripathy, S Thangamani, A Srivastava
Journal of Chemical Theory and Computation 16 (12), 7800-7816, 2020
Characterizing Polymer Hydration Shell Compressibilities with the Small-System Method
M Tripathy, S Bharadwaj, SJ B, NFA van der Vegt
Nanomaterials 10 (8), 1460, 2020
Toward Transferable Coarse‐Grained Potentials for Poly‐Aromatic Hydrocarbons: A Force Matching Approach
M Tripathy, U Agarwal, PBS Kumar
Macromolecular Theory and Simulations 28 (1), 1800040, 2019
How Much Can We Coarse‐Grain while Retaining the Chemical Specificity? A Study of Sulfonated Poly (ether ether ketone)
M Tripathy, AP Deshpande, PBS Kumar
Macromolecular Theory and Simulations 25 (2), 155-169, 2016
How does temperature affect the dynamics of SARS-CoV-2 M proteins? Insights from molecular dynamics simulations
SL Rath, M Tripathy, N Mandal
The Journal of Membrane Biology 255 (2-3), 341-356, 2022
Non-affine deformation of free volume during strain dependent diffusion in polymer thin films
S Mathesan, M Tripathy, A Srivastava, P Ghosh
Polymer 155, 177-186, 2018
Dynamical coarse-grained models of molecular liquids and their ideal and non-ideal mixtures
M Tripathy, V Klippenstein, NFA van der Vegt
The Journal of Chemical Physics 159 (9), 2023
Lipid Packing in Biological Membranes Governs Protein Localization and Membrane Permeability
M Tripathy, A Srivastava
Biophysical Journal, 2023
Protein as evolvable functionally constrained amorphous matter
M Tripathy, A Srivastava, S Sastry, M Rao
Journal of Biosciences 47 (4), 73, 2022
Solvation shell thermodynamics of extended hydrophobic solutes in mixed solvents
M Tripathy, S Bharadwaj, NFA van der Vegt
The Journal of Chemical Physics 156 (16), 2022
Using Packing Defects in Heterogeneous Biological Membrane as a Lens to Explore Protein Localization Propensity and Small Molecule Permeability
M Tripathy, A Srivastava
bioRxiv, 2022.09. 20.508633, 2022
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