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Nikita Vasilyev
Nikita Vasilyev
New York University School of Medicine
Verified email at nyumc.org
Title
Cited by
Cited by
Year
Crystal structure reveals specific recognition of a G-quadruplex RNA by a β-turn in the RGG motif of FMRP
N Vasilyev, A Polonskaia, JC Darnell, RB Darnell, DJ Patel, A Serganov
Proceedings of the National Academy of Sciences 112 (39), E5391-E5400, 2015
2022015
Inhibitors of bacterial H2S biogenesis targeting antibiotic resistance and tolerance
K Shatalin, A Nuthanakanti, A Kaushik, D Shishov, A Peselis, ...
Science 372 (6547), 1169-1175, 2021
1282021
Structural basis of Dot1L stimulation by histone H2B lysine 120 ubiquitination
MI Valencia-Sánchez, P De Ioannes, M Wang, N Vasilyev, R Chen, ...
Molecular cell 74 (5), 1010-1019. e6, 2019
1262019
Structure of RNA polymerase bound to ribosomal 30S subunit
G Demo, A Rasouly, N Vasilyev, V Svetlov, AB Loveland, R Diaz-Avalos, ...
Elife 6, e28560, 2017
1002017
Structure of the Qβ replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins
RT Kidmose, NN Vasiliev, AB Chetverin, GR Andersen, CR Knudsen
Proceedings of the National Academy of Sciences 107 (24), 10884-10889, 2010
882010
A novel RNA phosphorylation state enables 5′ end-dependent degradation in Escherichia coli
DJ Luciano, N Vasilyev, J Richards, A Serganov, JG Belasco
Molecular cell 67 (1), 44-54. e6, 2017
792017
The structure of a virus-encoded nucleosome
MI Valencia-Sánchez, S Abini-Agbomson, M Wang, R Lee, N Vasilyev, ...
Nature structural & molecular biology 28 (5), 413-417, 2021
472021
Crucial role and mechanism of transcription-coupled DNA repair in bacteria
BK Bharati, M Gowder, F Zheng, K Alzoubi, V Svetlov, V Kamarthapu, ...
Nature 604 (7904), 152-159, 2022
412022
Ribosomal protein S1 functions as a termination factor in RNA synthesis by Qβ phage replicase
NN Vasilyev, ZS Kutlubaeva, VI Ugarov, HV Chetverina, AB Chetverin
Nature communications 4 (1), 1781, 2013
372013
Structures of RNA complexes with the Escherichia coli RNA pyrophosphohydrolase RppH unveil the basis for specific 5′-end-dependent mRNA decay
N Vasilyev, A Serganov
Journal of Biological Chemistry 290 (15), 9487-9499, 2015
352015
Analysing the fitness cost of antibiotic resistance to identify targets for combination antimicrobials
A Rasouly, Y Shamovsky, V Epshtein, K Tam, N Vasilyev, Z Hao, G Quarta, ...
Nature microbiology 6 (11), 1410-1423, 2021
202021
Importance of a diphosphorylated intermediate for RppH-dependent RNA degradation
DJ Luciano, N Vasilyev, J Richards, A Serganov, JG Belasco
RNA biology 15 (6), 703-706, 2018
182018
Inheritance of repressed chromatin domains during S phase requires the histone chaperone NPM1
TM Escobar, JR Yu, S Liu, K Lucero, N Vasilyev, E Nudler, D Reinberg
Science advances 8 (17), eabm3945, 2022
162022
Structural and kinetic insights into stimulation of RppH-dependent RNA degradation by the metabolic enzyme DapF
A Gao, N Vasilyev, DJ Luciano, R Levenson-Palmer, J Richards, ...
Nucleic acids research 46 (13), 6841-6856, 2018
162018
Noncanonical features and modifications on the 5′‐end of bacterial sRNAs and mRNAs
N Vasilyev, A Gao, A Serganov
Wiley Interdisciplinary Reviews: RNA 10 (2), e1509, 2019
152019
PIM1 phosphorylation of the androgen receptor and 14-3-3 ζ regulates gene transcription in prostate cancer
SE Ruff, N Vasilyev, E Nudler, SK Logan, MJ Garabedian
Communications Biology 4 (1), 1221, 2021
122021
Principles of RNA and nucleotide discrimination by the RNA processing enzyme RppH
A Gao, N Vasilyev, A Kaushik, W Duan, A Serganov
Nucleic acids research 48 (7), 3776-3788, 2020
122020
Preparation of short 5′-triphosphorylated oligoribonucleotides for crystallographic and biochemical studies
N Vasilyev, A Serganov
Nucleic Acid Crystallography: Methods and Protocols, 11-20, 2016
82016
Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas9
EM Briggs, P Mita, X Sun, S Ha, N Vasilyev, ZR Leopold, E Nudler, ...
Mobile DNA 12, 1-12, 2021
62021
Isolation and crystallization of a chimeric Qβ replicase containing Thermus thermophilus EF-Ts
NN Vasiliev, L Jenner, MM Yusupov, AB Chetverin
Biochemistry (Moscow) 75, 989-994, 2010
62010
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