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Omid Shams Solari
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Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors
L Orsini, D Gilbert, R Podicheti, M Jansen, JB Brown, OS Solari, ...
Scientific data 3, 160030, 2016
131*2016
Pattern of DNA Methylation in Daphnia: Evolutionary Perspective
J Kvist, C Gonçalves Athanàsio, O Shams Solari, JB Brown, JK Colbourne, ...
Genome biology and evolution 10 (8), 1988-2007, 2018
532018
Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean‐specific genes
L Orsini, JB Brown, O Shams Solari, D Li, S He, R Podicheti, MH Stoiber, ...
Molecular ecology 27 (4), 886-897, 2018
472018
Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy
H Arbel, S Basu, WW Fisher, AS Hammonds, KH Wan, S Park, ...
Proceedings of the National Academy of Sciences 116 (3), 900-908, 2019
222019
Sparse canonical correlation analysis via concave minimization
OS Solari, JB Brown, PJ Bickel
arXiv preprint arXiv:1909.07947, 2019
102019
Circulating differential methylation allele fraction (DMAF) strongly correlates with circulating tumor DNA (ctDNA) variant allele fraction (VAF)
P Srinivasan, TC Chen, E Haghshenas, M Kordi, I Tunc, W Chan, ...
Cancer Research 84 (6_Supplement), 2409-2409, 2024
2024
Comprehensive analysis of differentially methylated regions in colorectal cancer (CRC).
O Solari, T Constantin, Y Jiang, W Chan, I Tunc, P Srinivasan, M Kordi, ...
Journal of Clinical Oncology 42 (3_suppl), 73-73, 2024
2024
Comparison of colorectal cancer (CRC) characteristics across genetic ancestries: Implications for early cancer detection (ECD).
P Myer, P Srinivasan, SL Bristow, S Krinshpun, O Solari, VN Aushev, ...
Journal of Clinical Oncology 42 (3_suppl), 164-164, 2024
2024
Tail Probability Estimation of Factor Models with Regularly-Varying Tails: Asymptotics and Efficient Estimation
F Pourbabaee, O Shams Solari
Available at SSRN 4078304, 2022
2022
Cell-free DNA fragments inform epigenomic mechanisms for early detection of breast cancer
E Gafni, A Harvey, A Jaroszewicz, OS Solari, J Landolin, M Barbirou, ...
Cancer Research 81 (13_Supplement), 2105-2105, 2021
2021
BLOCCS: Block Sparse Canonical Correlation Analysis With Application To Interpretable Omics Integration
OS Solari, R Safavi, JB Brown
arXiv preprint arXiv:1909.07944, 2019
2019
BLOCCS: Block Sparse Canonical Correlation Analysis With Application To Interpretable Omics Integration
O Shams Solari, R Safavi, JB Brown
arXiv e-prints, arXiv: 1909.07944, 2019
2019
Large Deviations of Factor Models with Regularly-Varying Tails: Asymptotics and Efficient Estimation
F Pourbabaee, OS Solari
arXiv preprint arXiv:1903.12299, 2019
2019
Large-Scale Interpretable Multi-View Learning for Very High-Dimensional Problems with Application to Multi-Omic Data
OS Solari
University of California, Berkeley, 2019
2019
Large-Scale Interpretable Multi-View Learning for Very High-Dimensional Problems with Application to Multi-Omic Data
O Shams Solari
UC Berkeley, 2019
2019
Large-Scale Interpretable Multi-View Learning for Very High-Dimensional Problems with
O Shams Solari
2019
Large Deviations of Linear Models with Regularly-Varying Tails: Asymptotics and Efficient Estimation
F Pourbabaee, OS Solari
arxiv 1903 (12299), 24, 2019
2019
Pattern of DNA methylation in Daphnia
J Kvist, CG Athanàsio, OS Solari, J Brown, J Colbourne, ME Pfrender, ...
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