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Daniel Bím
Daniel Bím
Researcher, IOCB Prague
Verified email at uochb.cas.cz
Title
Cited by
Cited by
Year
Toward accurate conformational energies of smaller peptides and medium-sized macrocycles: MPCONF196 benchmark energy data set
J Rezac, D Bím, O Gutten, L Rulisek
Journal of chemical theory and computation 14 (3), 1254-1266, 2018
942018
Beyond the classical thermodynamic contributions to hydrogen atom abstraction reactivity
D Bím, M Maldonado-Domínguez, L Rulíšek, M Srnec
Proceedings of the National Academy of Sciences 115 (44), E10287-E10294, 2018
842018
Elucidating the mechanism of excited-state bond homolysis in nickel–bipyridine photoredox catalysts
DA Cagan, D Bím, B Silva, NP Kazmierczak, BJ McNicholas, RG Hadt
Journal of the American Chemical Society 144 (14), 6516-6531, 2022
532022
Local electric fields as a natural switch of heme-iron protein reactivity
D Bím, AN Alexandrova
ACS catalysis 11 (11), 6534-6546, 2021
482021
Cytosine radical cations: a gas‐phase study combining IRMPD spectroscopy, UVPD spectroscopy, ion–molecule reactions, and theoretical calculations
M Lesslie, JT Lawler, A Dang, JA Korn, D Bím, V Steinmetz, P Maître, ...
ChemPhysChem 18 (10), 1293-1301, 2017
322017
Copper (II) and zinc (II) complexes of conformationally constrained polyazamacrocycles as efficient catalysts for RNA model substrate cleavage in aqueous solution at …
D Bím, E Svobodová, V Eigner, L Rulíšek, J Hodačová
Chemistry–A European Journal 22 (30), 10426-10437, 2016
282016
Structural and computational basis for potent inhibition of glutamate carboxypeptidase II by carbamate-based inhibitors
C Barinka, Z Novakova, N Hin, D Bím, DV Ferraris, B Duvall, G Kabarriti, ...
Bioorganic & medicinal chemistry 27 (2), 255-264, 2019
272019
Electrochemical carbon dioxide capture and concentration
AM Zito, LE Clarke, JM Barlow, D Bím, Z Zhang, KM Ripley, CJ Li, ...
Chemical Reviews 123 (13), 8069-8098, 2023
262023
Accurate prediction of one-electron reduction potentials in aqueous solution by variable-temperature h-atom addition/abstraction methodology
D Bím, L Rulíšek, M Srnec
The Journal of Physical Chemistry Letters 7 (1), 7-13, 2016
252016
Proton–Electron Transfer to the Active Site Is Essential for the Reaction Mechanism of Soluble Δ9-Desaturase
D Bim, J Chalupsky, M Culka, EI Solomon, L Rulisek, M Srnec
Journal of the American Chemical Society 142 (23), 10412-10423, 2020
242020
Molecular design of redox carriers for electrochemical CO 2 capture and concentration
JM Barlow, LE Clarke, Z Zhang, D Bím, KM Ripley, A Zito, FR Brushett, ...
Chemical Society Reviews 51 (20), 8415-8433, 2022
222022
Macrocycle conformational sampling by DFT-D3/COSMO-RS methodology
O Gutten, D Bim, J Rezac, L Rulisek
Journal of Chemical Information and Modeling 58 (1), 48-60, 2018
212018
Preparation of (Pentafluorosulfanyl) benzenes by Direct Fluorination of Diaryldisulfides: Synthetic Approach and Mechanistic Aspects
J Ajenjo, B Klepetářová, M Greenhall, D Bím, M Culka, L Rulíšek, P Beier
Chemistry–A European Journal 25 (48), 11375-11382, 2019
192019
Electrostatic regulation of blue copper sites
D Bím, AN Alexandrova
Chemical Science 12 (34), 11406-11413, 2021
182021
Increase in solubility of poorly-ionizable pharmaceuticals by salt formation: A case of agomelatine sulfonates
E Skořepová, D Bím, M Husak, J Klimes, A Chatziadi, L Ridvan, ...
Crystal Growth & Design 17 (10), 5283-5294, 2017
182017
Mono-and binuclear non-heme iron chemistry from a theoretical perspective
TA Rokob, J Chalupský, D Bim, PC Andrikopoulos, M Srnec, L Rulíšek
JBIC Journal of Biological Inorganic Chemistry 21, 619-644, 2016
182016
Reactive mode composition factor analysis of transition states: The case of coupled electron–proton transfers
M Maldonado-Domínguez, D Bím, R Fučík, R Čurík, M Srnec
Physical Chemistry Chemical Physics 21 (45), 24912-24918, 2019
172019
Radical reactions affecting polar groups in threonine peptide ions
HTH Nguyen, PC Andrikopoulos, D Bím, L Rulisek, A Dang, F Turecek
The Journal of Physical Chemistry B 121 (27), 6557-6569, 2017
142017
Predicting effects of site-directed mutagenesis on enzyme kinetics by QM/MM and QM calculations: a case of glutamate carboxypeptidase II
D Bím, M Navrátil, O Gutten, J Konvalinka, Z Kutil, M Culka, V Navrátil, ...
The Journal of Physical Chemistry B 126 (1), 132-143, 2022
132022
Computational electrochemistry as a reliable probe of experimentally elusive mononuclear nonheme iron species
D Bím, L Rulíšek, M Srnec
The Journal of Physical Chemistry C 122 (20), 10773-10782, 2018
132018
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